RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
FOXN3-219ENST00000615335 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-219ENST00000615335 F8W810 466 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CDH16O75309 829 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 GJC1P36383 396 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CLCN2P51788 898 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 PLCB3Q01970 1234 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 MAMLD1Q13495 774 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 STAT4Q14765 748 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 TMEM240Q5SV17 173 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 C1orf228Q6PIY5 440 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 Q6ZNX1 250 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 GSTA5Q7RTV2 222 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 EXD1Q8NHP7 514 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 VPS50Q96JG6 964 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 SENP8Q96LD8 212 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
FOXN3-219ENST00000615335 THEGQ9P2T0 379 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 TBK1Q9UHD2 729 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 NAALADL1Q9UQQ1 740 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 BOLA2-SMG1P6H3BVE0 249 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 I3L4J1 428 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CILPO75339 1184 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 SERPINB7O75635 380 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CBX6O95503 412 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 ITGB1P05556 798 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CFHP08603 1231 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 GNA15P30679 374 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 CETN2P41208 172 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 NOMO3P69849 1222 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 ORC1Q13415 861 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 MPP2Q14168 576 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 RGS9BPQ6ZS82 235 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 OR6B3Q8NGW1 331 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 ZNF398Q8TD17 642 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 VCPIP1Q96JH7 1222 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 C9orf72Q96LT7 481 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 SCINQ9Y6U3 715 aa13.44□□□□□ -0.26
FOXN3-219ENST00000615335 ARHGAP10A1A4S6 786 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 GSC2O15499 205 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 AP1G1O43747 822 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SSTR3P32745 418 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 BRCC3P46736 316 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 NDST1P52848 882 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 MED21Q13503 144 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TIGD5Q53EQ6 642 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 PLEKHA7Q6IQ23 1121 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 KLHL35Q6PF15 583 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 PHF13Q86YI8 300 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SRRM1Q8IYB3 904 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TTC39CQ8N584 583 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 CASP10Q92851 521 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 BHMTQ93088 406 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 DNAJC1Q96KC8 554 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 MIPEPQ99797 713 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 FOXP3Q9BZS1 431 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 CXXC1Q9P0U4 656 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 HMGXB4Q9UGU5 601 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 NRP1O14786 923 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TADA2AO75478 443 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 RPL5P46777 297 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 XIAPP98170 497 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 INCA1Q0VD86 236 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 ASPHQ12797 758 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SYCP2LQ5T4T6 812 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 ADGRF2Q8IZF7 708 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 FAM124BQ9H5Z6 455 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 KIAA1522Q9P206 1035 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 PHTF1Q9UMS5 762 aa13.43□□□□□ -0.26
FOXN3-219ENST00000615335 HBS1LQ9Y450 684 aaKnown RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 TIMM13Q9Y5L4 95 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-219ENST00000615335 NT5C1B-RDH14C9J2C7 533 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 KLRC2P26717 231 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 GNL1P36915 607 aaPredicted RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 PBX3P40426 434 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 MAGEA4P43358 317 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ALDH7A1P49419 539 aaKnown RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ZNF132P52740 706 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ARFIP2P53365 341 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ARPC4P59998 168 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 PPP1R2P3Q6NXS1 205 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms