RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KRT81Q14533 505 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 LRRC36Q1X8D7 754 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 MDH1BQ5I0G3 518 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 FAM26DQ5JW98 314 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 SLC26A11Q86WA9 606 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 FNDC8Q8TC99 324 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 RILPQ96NA2 401 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 TCHPQ9BT92 498 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 C1orf112Q9NSG2 853 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 KRT37O76014 449 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 IFNB1P01574 187 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 RPLP2P05387 115 aaKnown RBP22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 HSPA13P48723 471 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 NCOA4Q13772 614 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 ANKRD22Q5VYY1 191 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 ZBTB33Q86T24 672 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 KBTBD6Q86V97 674 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 CBWD2Q8IUF1 395 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 ZFP28Q8NHY6 868 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 C11orf70Q9BRQ4 267 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 TMEM121Q9BTD3 319 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 FAIMQ9NVQ4 179 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 ITGB1BP2Q9UKP3 347 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 ST3GAL5Q9UNP4 418 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 PI4K2BG5E9Z4 385 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 PITPNM1O00562 1244 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 ACKR2O00590 384 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 TSPAN1O60635 241 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 SNRPAP09012 282 aaKnown RBP22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 RAG1P15918 1043 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 ARF4P18085 180 aaPredicted RBP22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 ACADVLP49748 655 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 GPNMBQ14956 572 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 TLR1Q15399 786 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 METTL25Q8N6Q8 603 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 NRDE2Q9H7Z3 1164 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 PRMT7Q9NVM4 692 aaPredicted RBP22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 CDH22Q9UJ99 828 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 PSMD13Q9UNM6 376 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 NR2E3Q9Y5X4 410 aa22.52■■□□□ 1.2
POLR2J3-220ENST00000613744 NBNO60934 754 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 TRMUO75648 421 aaKnown RBP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 CDKN2BP42772 138 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 ALDH1A3P47895 512 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 CHI3L2Q15782 390 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 MYLK3Q32MK0 819 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 GRAMD1BQ3KR37 738 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 BBS9Q3SYG4 887 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 DEFB128Q7Z7B8 93 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 NUDCD3Q8IVD9 361 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 WDR75Q8IWA0 830 aaKnown RBP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 FBXL18Q96ME1 805 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 THAP1Q9NVV9 213 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 PADI3Q9ULW8 664 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 PIN4Q9Y237 131 aaKnown RBP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 SCN5AQ14524 2016 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 hCG_2014768A0A024R1R8 64 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 TCRBV9S1A1TA0A576 114 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 CCDC160A6NGH7 325 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 E9PBE3 544 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 H3BNX3 289 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 DNAJA2O60884 412 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 SYN1P17600 705 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 PMLP29590 882 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 PRDX6P30041 224 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 BBS5Q8N3I7 341 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 SMYD1Q8NB12 490 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 TRPC4APQ8TEL6 797 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 DCUN1D1Q96GG9 259 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 ACO2Q99798 780 aaKnown RBP22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 FAM213AQ9BRX8 229 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 HAPLN2Q9GZV7 340 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 ZNHIT2Q9UHR6 403 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 POMPQ9Y244 141 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 AK5Q9Y6K8 562 aa22.51■■□□□ 1.19
POLR2J3-220ENST00000613744 HOXA11P31270 313 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 SERPINB6P35237 376 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 SLC25A3Q00325 362 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 TMED1Q13445 227 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 SPIDRQ14159 915 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 RABGAP1LQ5R372 815 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ZFYVE27Q5T4F4 411 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ATF7IP2Q5U623 682 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 EEF1DP3Q658K8 133 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 LLGL2Q6P1M3 1020 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 DUS1LQ6P1R4 473 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 DHRS4L2Q6PKH6 230 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 SV2AQ7L0J3 742 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ERI1Q8IV48 349 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 DPF3Q92784 378 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 KCNN1Q92952 543 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ABTB1Q969K4 478 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 BIRC8Q96P09 236 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 KCNK16Q96T55 309 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 MSTO1Q9BUK6 570 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 XPO7Q9UIA9 1087 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 TMEM191CA6NGB0 347 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 PIGRP01833 764 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms