RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TCAF2A6NFQ2 919 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 TIMM44O43615 452 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 SKILP12757 684 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 PDGFRAP16234 1089 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 PTPN9P43378 593 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 ZBED6P86452 979 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 ENPP2Q13822 863 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 ZNF234Q14588 700 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 E2F5Q15329 346 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 LPAL2Q16609 132 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 C15orf59Q2T9L4 293 aaPredicted RBP18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 CCDC14Q49A88 953 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 TDRD12Q587J7 1177 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 MBLAC2Q68D91 279 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 KIAA1211LQ6NV74 962 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 CEP68Q76N32 757 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 FAM131BQ86XD5 332 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 HMGB4Q8WW32 186 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 IGSF8Q969P0 613 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 CAPN11Q9UMQ6 739 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 SPAG17Q6Q759 2223 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 OTOGLQ3ZCN5 2332 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 GPR179Q6PRD1 2367 aa18.67■□□□□ 0.58
SEMA3B-211ENST00000612509 WASH3PC4AMC7 463 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 H0Y626 953 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 DDX3XO00571 662 aaKnown RBP eCLIP18.66■□□□□ 0.581e-8■□□□□ 10.9
SEMA3B-211ENST00000612509 GABRG2P18507 467 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 GPD1P21695 349 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 RRM1P23921 792 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 PRKCHP24723 683 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 IRAK1P51617 712 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 STARD3Q14849 445 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 RAB6CQ53S08 254 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 FSCBQ5H9T9 825 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 HGSNATQ68CP4 663 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 C14orf80Q86SX3 495 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 CCAR2Q8N163 923 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 CYB5D2Q8WUJ1 264 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 SYN2Q92777 582 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 ERLEC1Q96DZ1 483 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 MCEEQ96PE7 176 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 SIK2Q9H0K1 926 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 RAB6CQ9H0N0 254 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 TMPRSS4Q9NRS4 437 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 SNX10Q9Y5X0 201 aa18.66■□□□□ 0.58
SEMA3B-211ENST00000612509 SIGLEC16A6NMB1 481 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 ATMINO43313 823 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 ENDOD1O94919 500 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 GZMAP12544 262 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 RFC1P35251 1148 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 PTPRNQ16849 979 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 C5orf22Q49AR2 442 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 PITRM1Q5JRX3 1037 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 PPP1R15BQ5SWA1 713 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 SH3PXD2AQ5TCZ1 1133 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 LAIR1Q6GTX8 287 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 WDR59Q6PJI9 974 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 SERPINA13PQ6UXR4 307 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 STRADAQ7RTN6 431 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 FAM172AQ8WUF8 416 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 RUBCNQ92622 972 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 VCPIP1Q96JH7 1222 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 HINFPQ9BQA5 517 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 KIAA1522Q9P206 1035 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 NCDNQ9UBB6 729 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 GMEB2Q9UKD1 530 aa18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 INTS6Q9UL03 887 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 LUC7L2Q9Y383 392 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-211ENST00000612509 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.65■□□□□ 0.581e-7■■□□□ 12
SEMA3B-211ENST00000612509 FAM186AA6NE01 2351 aa18.64■□□□□ 0.58
SEMA3B-211ENST00000612509 ZFHX2Q9C0A1 2572 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 CCP110O43303 1012 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 ATP5BP06576 529 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 DLDP09622 509 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 POLR2EP19388 210 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 NDUFV2P19404 249 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 CASP14P31944 242 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 CSKP41240 450 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 PLEKHG6Q3KR16 790 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 FNDC3BQ53EP0 1204 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 CXorf57Q6NSI4 855 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 ZNF683Q8IZ20 524 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 PGBD3Q8N328 593 aa18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 CENPIQ92674 756 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 BZW2Q9Y6E2 419 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 NYNRINQ9P2P1 1898 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-211ENST00000612509 DOCK4Q8N1I0 1966 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 ANKRD62A6NC57 917 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 DCLK1O15075 740 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 MOCS3O95396 460 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 ASLP04424 464 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 SERPING1P05155 500 aa18.63■□□□□ 0.57
SEMA3B-211ENST00000612509 HLA-EP13747 358 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms