RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 NETO2Q8NC67 525 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 SH3RF2Q8TEC5 729 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 FRMD8P1Q9BZ68 369 aaPredicted RBP18.08■□□□□ 0.48
SREK1-216ENST00000612404 TDP1Q9NUW8 608 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 ZNF148Q9UQR1 794 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 SOBPA7XYQ1 873 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 TRDMT1O14717 391 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 HOXC13P31276 330 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 VCPP55072 806 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 SLC7A5Q01650 507 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 SLC10A2Q12908 348 aaPredicted RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 NOMO1Q15155 1222 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 MAATS1Q7Z4T9 603 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 ZNF683Q8IZ20 524 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 USP13Q92995 863 aaPredicted RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 IGSF8Q969P0 613 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 HINFPQ9BQA5 517 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 ZYG11BQ9C0D3 744 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 EPC1Q9H2F5 836 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 DTLQ9NZJ0 730 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 CLEC1BQ9P126 229 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 ZMYM5Q9UJ78 669 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 H7C0C1 242 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 TTI1O43156 1089 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 ATP5OP48047 213 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 NR2C2P49116 596 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 IRAK1P51617 712 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 PAFAH1B3Q15102 231 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 ARTNQ5T4W7 220 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 PRPF38BQ5VTL8 546 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 B4GALNT4Q76KP1 1039 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 GSTA5Q7RTV2 222 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 TFAP2DQ7Z6R9 452 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 DDX42Q86XP3 938 aaKnown RBP eCLIP18.07■□□□□ 0.48
SREK1-216ENST00000612404 SLC35B2Q8TB61 432 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 MYEOVQ96EZ4 313 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 RUNDC3BQ96NL0 473 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 DDX50Q9BQ39 737 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 C10orf88Q9H8K7 445 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 PPARGC1AQ9UBK2 798 aaKnown RBP18.07■□□□□ 0.48
SREK1-216ENST00000612404 PCYOX1Q9UHG3 505 aa18.07■□□□□ 0.48
SREK1-216ENST00000612404 UQCRHLA0A096LP55 91 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 CTIFO43310 598 aaKnown RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 GREM1O60565 184 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 TSPAN3O60637 253 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 TBX10O75333 385 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 CNTN5O94779 1100 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 PRAMEF12O95522 483 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 UQCRHP07919 91 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 RBP3P10745 1247 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 SERPINB6P35237 376 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 DLX2Q07687 328 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 CES5AQ6NT32 575 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 DRICH1Q6PGQ1 229 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 DARS2Q6PI48 645 aaKnown RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 Q6ZNB5 142 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 GET4Q7L5D6 327 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 CIR1Q86X95 450 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 ARID3BQ8IVW6 561 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 CFAP52Q8N1V2 620 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 NPWQ8N729 165 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
SREK1-216ENST00000612404 ZSCAN18Q8TBC5 510 aaPredicted RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 HELZP42694 1942 aaKnown RBP18.06■□□□□ 0.48
SREK1-216ENST00000612404 IGLV3-10A0A075B6K4 115 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 ECEL1O95672 775 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 LATS1O95835 1130 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 DHX34Q14147 1143 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 ELF2Q15723 593 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 GLE1Q53GS7 698 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 ALFQ53S48 1182 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 RABGAP1LQ5R372 815 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 POTEHQ6S545 545 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 HTR3DQ70Z44 454 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 BZW1Q7L1Q6 419 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 RTL3Q8N8U3 475 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 GRK7Q8WTQ7 553 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 LRRN4Q8WUT4 740 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 NKD2Q969F2 451 aaPredicted RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 TMEM121Q9BTD3 319 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 ADAM7Q9H2U9 754 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 FEZ2Q9UHY8 353 aaPredicted RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 RHOQP17081 205 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 POU3F3P20264 500 aaPredicted RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 OASLQ15646 514 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 ATAT1Q5SQI0 421 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 NPAS3Q8IXF0 933 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 FGF13Q92913 245 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 CELF6Q96J87 481 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 STOML2Q9UJZ1 356 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 ZNF510Q9Y2H8 683 aa18.05■□□□□ 0.48
SREK1-216ENST00000612404 ZFP37Q9Y6Q3 630 aaPredicted RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 SPTBN5Q9NRC6 3674 aaKnown RBP18.05■□□□□ 0.48
SREK1-216ENST00000612404 BRWD1Q9NSI6 2320 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 DRGXA6NNA5 263 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 HEXIM1O94992 359 aaKnown RBP18.04■□□□□ 0.48
SREK1-216ENST00000612404 PTGIRP43119 386 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 LMNB2Q03252 620 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 PPP1R7Q15435 360 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms