RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PIEZO1Q92508 2521 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 F5H5T6 163 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 SLC9A3R1O14745 358 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 CREB3O43889 395 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 TJP3O95049 919 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 KRT10P13645 584 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 ZFXP17010 805 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 FCARP24071 287 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 GBP2P32456 591 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 TPI1P60174 286 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 KLF1Q13351 362 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 TFDP2Q14188 446 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 SLC9A4Q6AI14 798 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 BBS12Q6ZW61 710 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 CHSY1Q86X52 802 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 BBS7Q8IWZ6 715 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 MAIP1Q8WWC4 291 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 IGSF8Q969P0 613 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 RSPRY1Q96DX4 576 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 MS4A14Q96JA4 679 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 HERPUD2Q9BSE4 406 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 CATSPERBQ9H7T0 1116 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 RRAGDQ9NQL2 400 aaPredicted RBP16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 ARHGEF4Q9NR80 690 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 VANGL2Q9ULK5 521 aa16.47■□□□□ 0.23
CLTCL1-207ENST00000611723 HEPACAM2A8MVW5 462 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 PGRMC1O00264 195 aaKnown RBP16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 DCLK1O15075 740 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 FGF10O15520 208 aaPredicted RBP16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 FGGP02679 453 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 IL9P15248 144 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 RHOQP17081 205 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 ERCC2P18074 760 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 AMPD1P23109 780 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 EPHB2P29323 1055 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 GGCXP38435 758 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 VIPR2P41587 438 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 PAFAH1B1P43034 410 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 PUS10Q3MIT2 529 aaKnown RBP16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 TANGO2Q6ICL3 276 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 ZNF572Q7Z3I7 529 aaPredicted RBP16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 RFX6Q8HWS3 928 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 LGI2Q8N0V4 545 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 BPIFB1Q8TDL5 484 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 ELSPBP1Q96BH3 223 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 HEMGNQ9BXL5 484 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 L2HGDHQ9H9P8 463 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 DONSONQ9NYP3 566 aa16.46■□□□□ 0.23
CLTCL1-207ENST00000611723 ANHXE9PGG2 379 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 PDE2AO00408 941 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 APOL1O14791 398 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 DAPK3O43293 454 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 CST8O60676 142 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ECI2O75521 394 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ADCY2Q08462 1091 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 LONRF2Q1L5Z9 754 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 MPP7Q5T2T1 576 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 KAZNQ674X7 775 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 RNF43Q68DV7 783 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 RFWD3Q6PCD5 774 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 MTSS1LQ765P7 747 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 NLRP14Q86W24 1093 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 MFSD6LQ8IWD5 586 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ZDHHC14Q8IZN3 488 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ADGRG2Q8IZP9 1017 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 GJD3Q8N144 294 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 PLD5Q8N7P1 536 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 OSCP1Q8WVF1 389 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 MYEOVQ96EZ4 313 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ZYG11BQ9C0D3 744 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 TMEM248Q9NWD8 314 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 ZNF212Q9UDV6 495 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 DOCK4Q8N1I0 1966 aa16.45■□□□□ 0.22
CLTCL1-207ENST00000611723 TCRBV7S2A1N4TA0A589 114 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 TGM2P21980 687 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 NR2C2P49116 596 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 CDH4P55283 916 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 PAFAH1B3Q15102 231 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 SMAD2Q15796 467 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 MPPE1Q53F39 396 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 CCDC181Q5TID7 509 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 CHST9Q7L1S5 443 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 LZTR1Q8N653 840 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 RTL3Q8N8U3 475 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 TDRD5Q8NAT2 981 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 TTC13Q8NBP0 860 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 TMA16Q96EY4 203 aaKnown RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 CAPZA3Q96KX2 299 aa16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 PRICKLE1Q96MT3 831 aaPredicted RBP16.44■□□□□ 0.22
CLTCL1-207ENST00000611723 RPRD1AQ96P16 312 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms