RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TTLL12Q14166 644 aaPredicted RBP22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CA9Q16790 459 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CASC4Q6P4E1 433 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CPSF7Q8N684 471 aaKnown RBP22.93■■□□□ 1.26
SHANK2-220ENST00000608988 HIPK4Q8NE63 616 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 MIPOL1Q8TD10 442 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 HTR3CQ8WXA8 447 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 SEPT1Q8WYJ6 367 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 PPP1R14BQ96C90 147 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CDT1Q9H211 546 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 TSPAN16Q9UKR8 245 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 LOC100653049A0A140TA62 436 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 ZBTB14O43829 449 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 DGKIO75912 1065 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 KRT34O76011 436 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 ITGB3P05106 788 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 APOA4P06727 396 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 PFKMP08237 780 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 NFICP08651 508 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 CXCL8P10145 99 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 ADORA2AP29274 412 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 ARRB2P32121 409 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 SCNN1AP37088 669 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 APOFQ13790 326 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 KLHDC10Q6PID8 442 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 BNC2Q6ZN30 1099 aaPredicted RBP22.92■■□□□ 1.26
SHANK2-220ENST00000608988 CHST13Q8NET6 341 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 CATSPER2Q96P56 530 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 OCEL1Q9H607 264 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 RCOR3Q9P2K3 495 aaPredicted RBP22.92■■□□□ 1.26
SHANK2-220ENST00000608988 RIMS3Q9UJD0 308 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 C19orf81C9J6K1 198 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 OR6B1O95007 311 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 POLBP06746 335 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 CYP3A5P20815 502 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 SPRP35270 261 aaPredicted RBP22.92■■□□□ 1.26
SHANK2-220ENST00000608988 GBE1Q04446 702 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 RFTN1Q14699 578 aaPredicted RBP22.92■■□□□ 1.26
SHANK2-220ENST00000608988 TMEM110Q86TL2 294 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 ZNF280CQ8ND82 737 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 CLMNQ96JQ2 1002 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 NT5C1AQ9BXI3 368 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 TCF7L2Q9NQB0 619 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 AP4B1Q9Y6B7 739 aa22.92■■□□□ 1.26
SHANK2-220ENST00000608988 PGM3O95394 542 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 FAM58BPP0C7Q3 252 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 TGFB3P10600 412 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 MCF2P10911 925 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 PIK3R1P27986 724 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 GRIA1P42261 906 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 NR1H2P55055 460 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 SLC10A2Q12908 348 aaPredicted RBP22.91■■□□□ 1.26
SHANK2-220ENST00000608988 NADK2Q4G0N4 442 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 VWA5B1Q5TIE3 1220 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 ATG14Q6ZNE5 492 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 RDH11Q8TC12 318 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 ARNTL2Q8WYA1 636 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 CENPIQ92674 756 aaPredicted RBP22.91■■□□□ 1.26
SHANK2-220ENST00000608988 HPDLQ96IR7 371 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 MYOZ2Q9NPC6 264 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 MTMR10Q9NXD2 777 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 HESX1Q9UBX0 185 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 KAT6AQ92794 2004 aa22.91■■□□□ 1.26
SHANK2-220ENST00000608988 LACTBL1A8MY62 500 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PYGLP06737 847 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SPATA31D3P0C874 917 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SRGAP2BP0DMP2 458 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 NDST1P52848 882 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 CYLC2Q14093 348 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 FLOT2Q14254 428 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 GOLGA7BQ2TAP0 167 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PIGGQ5H8A4 983 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PPP6R3Q5H9R7 873 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 EEF1DP3Q658K8 133 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 MAP1SQ66K74 1059 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SPATA31D4Q6ZUB0 917 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PGAM4Q8N0Y7 254 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PIWIL1Q96J94 861 aaKnown RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 LENG8Q96PV6 779 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SNX15Q9NRS6 342 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 CHCHD3Q9NX63 227 aaKnown RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 UBAP1Q9NZ09 502 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SLCO1B7G3V0H7 640 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 FAM200BP0CF97 657 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 MGAT1P26572 445 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 HPCAP84074 193 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 TMEM132AQ24JP5 1023 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 ZNF423Q2M1K9 1284 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 PKDCCQ504Y2 493 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 JADE1Q6IE81 842 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 TDRD5Q8NAT2 981 aaKnown RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SLC7A14Q8TBB6 771 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 KHSRPQ92945 711 aaKnown RBP eCLIP22.9■■□□□ 1.264e-9■■■■■ 32
SHANK2-220ENST00000608988 CERS2Q96G23 380 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 RBBP8Q99708 897 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 C11orf84Q9BUA3 381 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-220ENST00000608988 NFKBIZQ9BYH8 718 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 SHCBP1LQ9BZQ2 653 aa22.9■■□□□ 1.26
SHANK2-220ENST00000608988 ILKAPQ9H0C8 392 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms