RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 TCP11X2Q5H9J9 407 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 RABGAP1LQ5R372 815 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 SH3PXD2AQ5TCZ1 1133 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 FAM183BPQ6ZVS7 135 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 FAM124AQ86V42 546 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 TTC17Q96AE7 1141 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 SLC2A13Q96QE2 648 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 MIR1-1HGQ9H1L0 117 aa13.69□□□□□ -0.22
TOM1-218ENST00000608674 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
TOM1-218ENST00000608674 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
TOM1-218ENST00000608674 KNL1Q8NG31 2342 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 ARHGAP33O14559 1287 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 OPHN1O60890 802 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 IGLV3-25P01717 112 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 DNTTP04053 509 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 ERBB2P04626 1255 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 CSRP1P21291 193 aaKnown RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 MAOBP27338 520 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 PITX1P78337 314 aaPredicted RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 ZBTB16Q05516 673 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 NME3Q13232 169 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 MTA1Q13330 715 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 TTC31Q49AM3 519 aaPredicted RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 PITRM1Q5JRX3 1037 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 ZDHHC17Q8IUH5 632 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 GANCQ8TET4 914 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 SLC32A1Q9H598 525 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 CAPN10Q9HC96 672 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 PLCB1Q9NQ66 1216 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 PRSS16Q9NQE7 514 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 TAB2Q9NYJ8 693 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 FHOD1Q9Y613 1164 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 ASCC3Q8N3C0 2202 aaKnown RBP13.68□□□□□ -0.22
TOM1-218ENST00000608674 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 CACNA1BQ00975 2339 aa13.68□□□□□ -0.22
TOM1-218ENST00000608674 METTL12A8MUP2 240 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 DAB1O75553 588 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 CEACAM1P13688 526 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 UCHL3P15374 230 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 CYP11B1P15538 503 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 OXCT1P55809 520 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 RNASE9P60153 205 aaKnown RBP13.67□□□□□ -0.22
TOM1-218ENST00000608674 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
TOM1-218ENST00000608674 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 FSCBQ5H9T9 825 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
TOM1-218ENST00000608674 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 ZNF776Q68DI1 518 aaPredicted RBP13.67□□□□□ -0.22
TOM1-218ENST00000608674 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 MMS22LQ6ZRQ5 1243 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 SLC26A9Q7LBE3 791 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 SNX19Q92543 992 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 LMLNQ96KR4 655 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 CNTNAP3BQ96NU0 1288 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 PCED1AQ9H1Q7 454 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 RRN3Q9NYV6 651 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 ANGPTL2Q9UKU9 493 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 ERVW-1Q9UQF0 538 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 NCKAP1Q9Y2A7 1128 aa13.67□□□□□ -0.22
TOM1-218ENST00000608674 A0A1B0GTW7 788 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 GIPC1O14908 333 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 NOS2P35228 1153 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 NNMTP40261 264 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 MATKP42679 507 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 RPS14P62263 151 aaKnown RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 ZNF252P-AS1Q0IIN9 211 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 HNRNPA1L2Q32P51 320 aaKnown RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 FKBP15Q5T1M5 1219 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 DPY19L2P1Q6NXN4 242 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 SASS6Q6UVJ0 657 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 SND1Q7KZF4 910 aaKnown RBP eCLIP13.66□□□□□ -0.22
TOM1-218ENST00000608674 ERICH1Q86X53 443 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 ZCCHC9Q8N567 271 aaKnown RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 KDM1BQ8NB78 822 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 DEFB124Q8NES8 71 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 ANKRD20A12PQ8NF67 263 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 C18orf8Q96DM3 657 aa13.66□□□□□ -0.22
TOM1-218ENST00000608674 RPRD1AQ96P16 312 aaPredicted RBP13.66□□□□□ -0.22
TOM1-218ENST00000608674 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms