RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 LMAN2Q12907 356 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 ELF2Q15723 593 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 PLK5Q496M5 336 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
LINC00240-203ENST00000606878 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 LRSAM1Q6UWE0 723 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 SERPINA13PQ6UXR4 307 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 EMC1Q8N766 993 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 WFDC5Q8TCV5 224 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 TTC17Q96AE7 1141 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 IQCDQ96DY2 449 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 C1orf74Q96LT6 269 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 CFAP57Q96MR6 1250 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 RPRD1AQ96P16 312 aaPredicted RBP17.11■□□□□ 0.33
LINC00240-203ENST00000606878 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 RAD54BQ9Y620 910 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ANKRD62A6NC57 917 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ENDOD1O94919 500 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 EPHX1P07099 455 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 RDXP35241 583 aaKnown RBP17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ATP11AP98196 1134 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 KLHL30Q0D2K2 578 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ZNF177Q13360 481 aaPredicted RBP17.1■□□□□ 0.33
LINC00240-203ENST00000606878 SLC12A1Q13621 1099 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 FNDC3BQ53EP0 1204 aaKnown RBP17.1■□□□□ 0.33
LINC00240-203ENST00000606878 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 TRNP1Q6NT89 227 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 LRRC31Q6UY01 552 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
LINC00240-203ENST00000606878 CYB5D2Q8WUJ1 264 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 RLN3Q8WXF3 142 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 VCPIP1Q96JH7 1222 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 SPACA7Q96KW9 195 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 ADAM33Q9BZ11 813 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 CD248Q9HCU0 757 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 VANGL2Q9ULK5 521 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 VPS13AQ96RL7 3174 aa17.1■□□□□ 0.33
LINC00240-203ENST00000606878 A0A1B0GVM2 712 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 A0A1W2PQJ5 194 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 TCAF2A6NFQ2 919 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 C2CD4BA6NLJ0 364 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 ZNF217O75362 1048 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 ASLP04424 464 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
LINC00240-203ENST00000606878 PBX1P40424 430 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 P2RY2P41231 377 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 CSKP41240 450 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 PRKCIP41743 596 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 GSCP56915 257 aaPredicted RBP17.09■□□□□ 0.33
LINC00240-203ENST00000606878 ST8SIA6P61647 398 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 ARL13BQ3SXY8 428 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 CCDC14Q49A88 953 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 BNIPLQ7Z465 357 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 C14orf80Q86SX3 495 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 KIAA2013Q8IYS2 634 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 MCOLN2Q8IZK6 566 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 SYN2Q92777 582 aaPredicted RBP17.09■□□□□ 0.33
LINC00240-203ENST00000606878 IGSF8Q969P0 613 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 MRGPRX1Q96LB2 322 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 HAPLN3Q96S86 360 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 SYT11Q9BT88 431 aa17.09■□□□□ 0.33
LINC00240-203ENST00000606878 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
LINC00240-203ENST00000606878 BZW2Q9Y6E2 419 aaKnown RBP17.09■□□□□ 0.33
LINC00240-203ENST00000606878 TMCO5BA8MYB1 307 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 LRP3O75074 770 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 CLDN11O75508 207 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 GJB6O95452 261 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 GZMAP12544 262 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 SKILP12757 684 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 GPD1P21695 349 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 PTPN9P43378 593 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 ATXN1P54253 815 aaKnown RBP17.08■□□□□ 0.32
LINC00240-203ENST00000606878 SPEM2Q0P670 501 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 PTPRNQ16849 979 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 MAP7D1Q3KQU3 841 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 FUT11Q495W5 492 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 C5orf22Q49AR2 442 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 PITRM1Q5JRX3 1037 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 DNAJC24Q6P3W2 148 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 DCUN1D2Q6PH85 259 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 STRADAQ7RTN6 431 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
LINC00240-203ENST00000606878 FAM131BQ86XD5 332 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 TMPRSS6Q8IU80 811 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 JOSD2Q8TAC2 188 aa17.08■□□□□ 0.32
LINC00240-203ENST00000606878 TMEM245Q9H330 911 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms