RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 VPS37BQ9H9H4 285 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 YIPF1Q9Y548 306 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 HMGB1P1B2RPK0 211 aaPredicted RBP19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 E7EVH7 732 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 PPM1AP35813 382 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 KCNQ1P51787 676 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 HTRA4P83105 476 aaPredicted RBP19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 TWF1Q12792 350 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 TERF2Q15554 542 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 TRIP4Q15650 581 aaPredicted RBP19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 MS4A13Q5J8X5 152 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 ZNF567Q8N184 647 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 FBXO36Q8NEA4 188 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 C1orf74Q96LT6 269 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 FERMT1Q9BQL6 677 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 SLC12A6Q9UHW9 1150 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 ZMYND8Q9ULU4 1186 aaPredicted RBP19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 INSL6Q9Y581 213 aa19.73■□□□□ 0.75
TUBB4B-202ENST00000604929 ZNF840PA6NDX5 716 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 NCAM2O15394 837 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 STK10O94804 968 aaKnown RBP19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 LINC00271P0C7V0 271 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 ATP5C1P36542 298 aaKnown RBP19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 GARSP41250 739 aaKnown RBP19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 ATP1A2P50993 1020 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 PLD1Q13393 1074 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 AUHQ13825 339 aaKnown RBP19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 MANEALQ5VSG8 457 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 ARHGAP36Q6ZRI8 547 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 SERPINB12Q96P63 405 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 WDR83Q9BRX9 315 aaKnown RBP19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 CATSPERBQ9H7T0 1116 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 CDH23Q9H251 3354 aa19.72■□□□□ 0.75
TUBB4B-202ENST00000604929 GOLGA6L7A0A1B0GV03 622 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 LCHNA4D1U4 455 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 SMAPO00193 183 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CSH1P0DML2 217 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CSH2P0DML3 217 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CAPN2P17655 700 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 MX2P20592 715 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 SSTR1P30872 391 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 GRIA1P42261 906 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 LMAN1P49257 510 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 IRAK1P51617 712 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 MAGOHP61326 146 aaKnown RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 IFI35P80217 286 aaPredicted RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 PPIDQ08752 370 aaKnown RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 GALNT2Q10471 571 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 C6orf118Q5T5N4 469 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 RAP1GAP2Q684P5 730 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 C4orf22Q6V702 233 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 IGDCC3Q8IVU1 814 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 ATP6V0D2Q8N8Y2 350 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 ALG13Q9NP73 1137 aaKnown RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 RANBP2P49792 3224 aaKnown RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 RGS16O15492 202 aaPredicted RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CNPP09543 421 aaKnown RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 PTPN3P26045 913 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 TMC7Q7Z402 723 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 TFAP2DQ7Z6R9 452 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 DNAJB7Q7Z6W7 309 aaPredicted RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 PALM2Q8IXS6 379 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 BTN2A3PQ96KV6 586 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 AGAP3Q96P47 875 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 SLC39A8Q9C0K1 460 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 KLHL8Q9P2G9 620 aaPredicted RBP19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CTNNAL1Q9UBT7 734 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 CHMP2BQ9UQN3 213 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 RAD54BQ9Y620 910 aa19.71■□□□□ 0.75
TUBB4B-202ENST00000604929 E7ESA3 106 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 LILRB3O75022 631 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 PIAS1O75925 651 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 CXCL14O95715 111 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 ELK3P41970 407 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 GPX6P59796 221 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 TTC19Q6DKK2 380 aaPredicted RBP19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 C3orf62Q6ZUJ4 267 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 CAND1Q86VP6 1230 aaKnown RBP19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 PDCD7Q8N8D1 485 aaKnown RBP19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 MRRFQ96E11 262 aaKnown RBP19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 TTC25Q96NG3 672 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 TRPM5Q9NZQ8 1165 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 HSFX1Q9UBD0 423 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 TBK1Q9UHD2 729 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 DNMT3LQ9UJW3 386 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 SLC4A7Q9Y6M7 1214 aa19.7■□□□□ 0.74
TUBB4B-202ENST00000604929 FGF10O15520 208 aaPredicted RBP19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 TLL1O43897 1013 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 OPHN1O60890 802 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 CNTN5O94779 1100 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 NR1D1P20393 614 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 PSMB4P28070 264 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 HOXC13P31276 330 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 GABPB1Q06547 395 aaPredicted RBP19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 ALFQ53S48 1182 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 HECTD3Q5T447 861 aa19.69■□□□□ 0.74
TUBB4B-202ENST00000604929 AGBL2Q5U5Z8 902 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms