RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 BPGMP07738 259 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SCNN1GP51170 649 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 DAOAP59103 153 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PDE1BQ01064 536 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 BZW1Q7L1Q6 419 aaKnown RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TREML1Q86YW5 311 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SLC2A13Q96QE2 648 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PPARGC1AQ9UBK2 798 aaKnown RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GSTA2P09210 222 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GLUD2P49448 558 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 NIPAL4Q0D2K0 466 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TLDC1Q6P9B6 456 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CMC1Q7Z7K0 106 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 KCTD13Q8WZ19 329 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GORASP1Q9BQQ3 440 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 FAM105AQ9NUU6 356 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 LNPEPQ9UIQ6 1025 aa12.11□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GOLGA8TH3BQL2 631 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GYG2O15488 501 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CCDC22O60826 627 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TOMM70O94826 608 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PGK1P00558 417 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ITGA2BP08514 1039 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ESRRAP11474 423 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TPH1P17752 444 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 YY1P25490 414 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PTPN3P26045 913 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PGGT1BP53609 377 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TPI1P60174 286 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RCN2Q14257 317 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TAF1CQ15572 869 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ARL5CA6NH57 179 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PPP1R12AO14974 1030 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GSC2O15499 205 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ATP9BO43861 1147 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ENO1P06733 434 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 THP07101 528 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 MLNP12872 115 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PGAM1P18669 254 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SERPINB9P50453 376 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ALDH18A1P54886 795 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PAFAH1B3Q15102 231 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CST9Q5W186 159 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 DNAAF3Q8N9W5 541 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZNF570Q96NI8 536 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 DNAJC6O75061 913 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 POMCP01189 267 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 HUNKP57058 714 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 KDSRQ06136 332 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZBTB17Q13105 803 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 STX3Q13277 289 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TIGD5Q53EQ6 642 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CERCAMQ5T4B2 595 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PSTKQ8IV42 348 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TNS4Q8IZW8 715 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CDKL2Q92772 493 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 MFSD3Q96ES6 412 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RILPQ96NA2 401 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 COLEC11Q9BWP8 271 aa12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CHRNA1P02708 482 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 LTFP02788 710 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CALB2P22676 271 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 BDNFP23560 247 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ELF1P32519 619 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CD68P34810 354 aaPredicted RBP12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GDF6Q6KF10 455 aaPredicted RBP12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 MARK2Q7KZI7 788 aaKnown RBP12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZNF778Q96MU6 729 aa12.09□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms