RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 PHF24Q9UPV7 400 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.48■□□□□ 0.07
CCDC12-211ENST00000604367 IRAK2O43187 625 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 FKTNO75072 461 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 IGLV3-25P01717 112 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 MGAT1P26572 445 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 PBX3P40426 434 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 PPIDQ08752 370 aaKnown RBP15.48■□□□□ 0.07
CCDC12-211ENST00000604367 SPRED3Q2MJR0 410 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 CTXN3Q4LDR2 81 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 YTHDF3Q7Z739 585 aaKnown RBP15.48■□□□□ 0.07
CCDC12-211ENST00000604367 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
CCDC12-211ENST00000604367 UNC5BQ8IZJ1 945 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 SCML4Q8N228 414 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 TTC9BQ8N6N2 239 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 ATAD1Q8NBU5 361 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 GSDMBQ8TAX9 411 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 TRIM62Q9BVG3 475 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.071e-7■■■■■ 43.3
CCDC12-211ENST00000604367 TRIM17Q9Y577 477 aa15.48■□□□□ 0.07
CCDC12-211ENST00000604367 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
CCDC12-211ENST00000604367 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 NT5C1B-RDH14C9J2C7 533 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 TMEM189-UBE2V1I3L0A0 370 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 USP12O75317 370 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PAGE1O75459 146 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 MOCS2O96007 188 aaPredicted RBP15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PYGBP11216 843 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 ADRA1DP25100 572 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 SLC18A1P54219 525 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 CBLBQ13191 982 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 FAM126BQ8IXS8 530 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 STAMBPL1Q96FJ0 436 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 GPR62Q9BZJ7 368 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 OSER1Q9NX31 292 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 TRDMT1O14717 391 aaKnown RBP15.47■□□□□ 0.07
CCDC12-211ENST00000604367 NCAM2O15394 837 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 ZBTB24O43167 697 aaPredicted RBP15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PQBP1O60828 265 aaKnown RBP15.47■□□□□ 0.07
CCDC12-211ENST00000604367 SOAT2O75908 522 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 CSH1P0DML2 217 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 CSH2P0DML3 217 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PRKCHP24723 683 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 SERPINB6P35237 376 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 GARSP41250 739 aaKnown RBP15.47■□□□□ 0.07
CCDC12-211ENST00000604367 APLP1P51693 650 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 ZBTB17Q13105 803 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 BANPQ8N9N5 519 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PITPNM3Q9BZ71 974 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 UNC93B1Q9H1C4 597 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 SLC17A7Q9P2U7 560 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 ADAM28Q9UKQ2 775 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 PCDHA11Q9Y5I1 949 aa15.47■□□□□ 0.07
CCDC12-211ENST00000604367 SDR42E2A6NKP2 422 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 TRIM49D1C9J1S8 452 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 DFFAO00273 331 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 LPXNO60711 386 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 CCR1P32246 355 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 USP46P62068 366 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 CDK16Q00536 496 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 BFSP2Q13515 415 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 EIF4EBP2Q13542 120 aaPredicted RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 BMPR2Q13873 1038 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 ITIH4Q14624 930 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 NFE2Q16621 373 aaPredicted RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 PLEKHG4Q58EX7 1191 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 LRRC8BQ6P9F7 803 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 NUP93Q8N1F7 819 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 THOC1Q96FV9 657 aaKnown RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 SMOC2Q9H3U7 446 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 SLCO1B3Q9NPD5 702 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 MAGED2Q9UNF1 606 aaPredicted RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 USP15Q9Y4E8 981 aaPredicted RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 VWA8A3KMH1 1905 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 ZWINTO95229 277 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 MX2P20592 715 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 MAP2K2P36507 400 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 CDK7P50613 346 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 GALNT2Q10471 571 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 TCTN1Q2MV58 587 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 TTC39BQ5VTQ0 682 aaPredicted RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 MICALL1Q8N3F8 863 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 HDAC11Q96DB2 347 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 SCLYQ96I15 445 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 ALG13Q9NP73 1137 aaKnown RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 EIF2B3Q9NR50 452 aaKnown RBP15.46■□□□□ 0.07
CCDC12-211ENST00000604367 ARHGEF38Q9NXL2 777 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 SLC17A6Q9P2U8 582 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 SLC27A5Q9Y2P5 690 aa15.46■□□□□ 0.07
CCDC12-211ENST00000604367 MYO16Q9Y6X6 1858 aa15.46■□□□□ 0.06
CCDC12-211ENST00000604367 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 ALDH2P05091 517 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 MLNP12872 115 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 CGB2Q6NT52 195 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 CES3Q6UWW8 571 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 ARHGAP36Q6ZRI8 547 aa15.45■□□□□ 0.06
CCDC12-211ENST00000604367 BEND5Q7L4P6 421 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms