RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 FAM133BQ5BKY9 247 aaKnown RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 SPOCD1Q6ZMY3 1216 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 TDRD5Q8NAT2 981 aaKnown RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 SMRP1Q8NCR6 262 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 NT5C3BQ969T7 300 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 PABPC5Q96DU9 382 aaKnown RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 PRICKLE1Q96MT3 831 aaPredicted RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CSPG4P5Q96PW8 444 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 UBXN6Q9BZV1 441 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ZDHHC7Q9NXF8 308 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CD207Q9UJ71 328 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 A0A0A6YYK5 440 aaPredicted RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CCDC78A2IDD5 438 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 H0Y626 953 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 K7ERQ8 282 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CBX4O00257 560 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF500O60304 480 aaPredicted RBP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 MT-CO1P00395 513 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 LAMP2P13473 410 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 GKP32189 559 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 KDSRQ06136 332 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 AP1B1Q10567 949 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 TEX35Q5T0J7 233 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 POLNQ7Z5Q5 900 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 C12orf40Q86WS4 652 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 SYCE1Q8N0S2 351 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 FLCNQ8NFG4 579 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ACTL9Q8TC94 416 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CYB5D2Q8WUJ1 264 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CHFRQ96EP1 664 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 HEBP1Q9NRV9 189 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 TLR6Q9Y2C9 796 aa8.39□□□□□ -1.07
NOLC1-208ENST00000603946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.39□□□□□ -1.07
NOLC1-208ENST00000603946 ATG2AQ2TAZ0 1938 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 H7C0C1 242 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 J3KR12 359 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 MFSD11O43934 449 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 TACR2P21452 398 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CTNNA1P35221 906 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ARL4AP40617 200 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 PTPN9P43378 593 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ATP5OP48047 213 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 MLLT6P55198 1093 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 SEC13P55735 322 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 OTUD4Q01804 1114 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 PTPRRQ15256 657 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ARL13BQ3SXY8 428 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 PDE12Q6L8Q7 609 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 PQLC3Q8N755 202 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CENPIQ92674 756 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 AGAP3Q96P47 875 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ARHGEF4Q9NR80 690 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 DUS2Q9NX74 493 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CLUHO75153 1309 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 GREB1Q4ZG55 1949 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 COL4A3Q01955 1670 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 A8MX80 341 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ACSL4O60488 711 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 VAV1P15498 845 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CDKN2BP42772 138 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 STK19P49842 368 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 GDF10P55107 478 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ACCSLQ4AC99 568 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 IL31Q6EBC2 164 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 RHBDF2Q6PJF5 856 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 VITQ6UXI7 678 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 RFX8Q6ZV50 586 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 GSTA5Q7RTV2 222 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 GSPT2Q8IYD1 628 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ADGRG2Q8IZP9 1017 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 TRMT2BQ96GJ1 504 aaKnown RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 SLC39A13Q96H72 371 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 MSLNLQ96KJ4 702 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 TRIM51Q9BSJ1 452 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 OXCT2Q9BYC2 517 aaPredicted RBP8.38□□□□□ -1.07
NOLC1-208ENST00000603946 CIPCQ9C0C6 399 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF148Q9UQR1 794 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 ASB3Q9Y575 518 aa8.38□□□□□ -1.07
NOLC1-208ENST00000603946 GOLGA6L9A6NEM1 432 aa8.37□□□□□ -1.07
NOLC1-208ENST00000603946 F5H5T6 163 aa8.37□□□□□ -1.07
NOLC1-208ENST00000603946 GOLGA8MH3BSY2 632 aa8.37□□□□□ -1.07
NOLC1-208ENST00000603946 C1RP00736 705 aa8.37□□□□□ -1.07
NOLC1-208ENST00000603946 HNRNPA1P09651 372 aaKnown RBP eCLIP8.37□□□□□ -1.07
NOLC1-208ENST00000603946 DESP17661 470 aa8.37□□□□□ -1.07
NOLC1-208ENST00000603946 SLC11A2P49281 568 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms