RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TFDP2Q14188 446 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 NOMO1Q15155 1222 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 MANEALQ5VSG8 457 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 ARFGAP2Q8N6H7 521 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 NPWQ8N729 165 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 TIFAQ96CG3 184 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 CCDC114Q96M63 670 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 NACA2Q9H009 215 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 PRO3102Q9H379 93 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 UXTQ9UBK9 157 aaPredicted RBP17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 ASB3Q9Y575 518 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 DCLK1O15075 740 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 IRF1P10914 325 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 VCPP55072 806 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 GDF10P55107 478 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 TRIP13Q15645 432 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 SLC5A9Q2M3M2 681 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 AGBL2Q5U5Z8 902 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 NADSYN1Q6IA69 706 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 SPATS2Q86XZ4 545 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 C12orf76Q8N812 135 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ARL14EPQ8N8R7 260 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 UBLCP1Q8WVY7 318 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 TMEM121Q9BTD3 319 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 TRIM31Q9BZY9 425 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 RCOR3Q9P2K3 495 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 GOLGA6L7A0A1B0GV03 622 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 SRGAP2BP0DMP2 458 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ETS1P14921 441 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ERCC2P18074 760 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 TUBP50607 506 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 MS4A13Q5J8X5 152 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ZC3H18Q86VM9 953 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ZNF683Q8IZ20 524 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 ZNF707Q96C28 371 aaPredicted RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 HAPLN3Q96S86 360 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 RAB17Q9H0T7 212 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 OSBPL2Q9H1P3 480 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 DPH5Q9H2P9 285 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 CENPHQ9H3R5 247 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 DTLQ9NZJ0 730 aa17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 DNMT3BQ9UBC3 853 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-207ENST00000602716 SZT2Q5T011 3432 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 ANAPC1Q9H1A4 1944 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 MOSPD3O75425 235 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 APOEP02649 317 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 KLKB1P03952 638 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 EPHB2P29323 1055 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 HPDP32754 393 aaPredicted RBP17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 EIF3EP60228 445 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 DHX9Q08211 1270 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 RAP1GAP2Q684P5 730 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 ZNF276Q8N554 614 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 SHKBP1Q8TBC3 707 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 ADAMTS19Q8TE59 1207 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 ZNF473Q8WTR7 871 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 NKD2Q969F2 451 aaPredicted RBP17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 EPAS1Q99814 870 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 TXLNGYQ9BZA5 131 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 ASAH2Q9NR71 780 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 SLC12A6Q9UHW9 1150 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 NEU2Q9Y3R4 380 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 REV3LO60673 3130 aa17.87■□□□□ 0.45
PPFIA3-207ENST00000602716 PPFIA2O75334 1257 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 STC2O76061 302 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 ECEL1O95672 775 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 ZSCAN5DPP0CG00 497 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 TGM2P21980 687 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 DHX34Q14147 1143 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 DUSP6Q16828 381 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 SPDYCQ5MJ68 293 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 DUPD1Q68J44 220 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 PDE12Q6L8Q7 609 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 KLHDC10Q6PID8 442 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 POTEHQ6S545 545 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 NLRP14Q86W24 1093 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 CIR1Q86X95 450 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 P3H4Q92791 437 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 KLF16Q9BXK1 252 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 SMG9Q9H0W8 520 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 ATXN3LQ9H3M9 355 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 TLE6Q9H808 572 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 NDFIP2Q9NV92 336 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 MPP6Q9NZW5 540 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 CDH22Q9UJ99 828 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 VANGL2Q9ULK5 521 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 E9PAM4 449 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 OLFM2O95897 454 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 MBL2P11226 248 aaPredicted RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 VPS41P49754 854 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 RING1Q06587 406 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 RWDD4Q6NW29 188 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 ELMOD1Q8N336 334 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 MAB21L3Q8N8X9 362 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 CCT8L2Q96SF2 557 aa17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 CDK5RAP1Q96SZ6 601 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-207ENST00000602716 PRMT1Q99873 361 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms