RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 K7ELQ4 463 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 RNF225M0QZC1 329 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 O00370 1275 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 MID1O15344 667 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 LATO43561 262 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ACSL4O60488 711 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TBL1XO60907 577 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CLSTN1O94985 981 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 LDOC1O95751 146 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 F13A1P00488 732 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 MYL1P05976 194 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ATP5BP06576 529 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 ZSCAN22P10073 491 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 CDK4P11802 303 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 PFKFB1P16118 471 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 POLR2EP19388 210 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 CMA1P23946 247 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 NR2F2P24468 414 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CD38P28907 300 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 SLC8A1P32418 973 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 PSMC2P35998 433 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 CSKP41240 450 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CTSOP43234 321 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 ABCG1P45844 678 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ME1P48163 572 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 NXPH1P58417 271 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 DAOAP59103 153 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ARID5AQ03989 594 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 DNM1Q05193 864 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 C19orf57Q0VDD7 668 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ADIGQ0VDE8 80 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 DPYDQ12882 1025 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 PKP1Q13835 747 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CST6Q15828 149 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 FOXD4L6Q3SYB3 417 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 CCDC157Q569K6 752 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 KRT39Q6A163 491 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 FOXD4L3Q6VB84 417 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 MMS22LQ6ZRQ5 1243 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CEP57L1Q8IYX8 460 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ZNF843Q8N446 348 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TTC39CQ8N584 583 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 AADATQ8N5Z0 425 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 FBXL13Q8NEE6 735 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 OR2T34Q8NGX1 318 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 SNIP1Q8TAD8 396 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 UBA3Q8TBC4 463 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 RFFLQ8WZ73 363 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TFAP2BQ92481 460 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 SLC39A13Q96H72 371 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CNDP2Q96KP4 475 aaKnown RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 FCRL2Q96LA5 508 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 PRICKLE1Q96MT3 831 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 DCBLD2Q96PD2 775 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ACE2Q9BYF1 805 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 IMPG2Q9BZV3 1241 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ERVMER34-1Q9H9K5 563 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 CNGB3Q9NQW8 809 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 ABCC13Q9NSE7 274 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 USP25Q9UHP3 1055 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 TSPAN16Q9UKR8 245 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 MUC22E2RYF6 1773 aaPredicted RBP6.35□□□□□ -1.39
VRK3-220ENST00000600259 ATMQ13315 3056 aa6.35□□□□□ -1.39
VRK3-220ENST00000600259 COL5A1P20908 1838 aaPredicted RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 ITIH6Q6UXX5 1313 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 A0A1W2PP55 124 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 FAM47DPA6NHR8 397 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 TLR4O00206 839 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 IRAK2O43187 625 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 RFPL3O75679 317 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 ASLP04424 464 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 ITGAVP06756 1048 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 GIMD1P0DJR0 217 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 VDRP11473 427 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 KRT13P13646 458 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 PLA2G2AP14555 144 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 GOT1P17174 413 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 TRIM21P19474 475 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 RPL13P26373 211 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 EPHA8P29322 1005 aaPredicted RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 DRD3P35462 400 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 RPL34P49207 117 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 METAP1P53582 386 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 C21orf59P57076 290 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 RPS24P62847 133 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 SEMG2Q02383 582 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 TLE3Q04726 772 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 BST2Q10589 180 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 EIF4EBP2Q13542 120 aaPredicted RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 CNGA2Q16280 664 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 GOLGA7BQ2TAP0 167 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 EDRF1Q3B7T1 1238 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 PROX2Q3B8N5 592 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 TTC31Q49AM3 519 aaPredicted RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 CBWD6Q4V339 395 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 SGO2Q562F6 1265 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms