RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
CHMP2A-206ENST00000600118 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 TCAF2A6NFQ2 919 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 WASH4PA8MWX3 477 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 CREB3O43889 395 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 SRGAP2O75044 1071 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 CNTN5O94779 1100 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 KRT1P04264 644 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ADH5P11766 374 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 RHOQP17081 205 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 GOT1P17174 413 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 KDELR1P24390 212 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 RWDD2BP57060 319 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 GAD2Q05329 585 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 DPYSQ14117 519 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ALFQ53S48 1182 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 PPP6R3Q5H9R7 873 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 RFX8Q6ZV50 586 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 MAP7D3Q8IWC1 876 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ETFBKMTQ8IXQ9 262 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 KCTD6Q8NC69 237 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 DDI1Q8WTU0 396 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 CSPG4P5Q96PW8 444 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 ZYG11BQ9C0D3 744 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 FBXO10Q9UK96 956 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 JRKLQ9Y4A0 524 aa13.04□□□□□ -0.32
CHMP2A-206ENST00000600118 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 NEDD8-MDP1E9PL57 170 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 PI4K2BG5E9Z4 385 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 H3BRJ5 948 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 FANCGO15287 622 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 FGF10O15520 208 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CACNG3O60359 315 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TBL1XO60907 577 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CLDN11O75508 207 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 ZRANB2O95218 330 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CYBBP04839 570 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TYRP14679 529 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 MSNP26038 577 aaKnown RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 EPHB2P29323 1055 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 GJA4P35212 333 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CDKN2BP42772 138 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CDH4P55283 916 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TPI1P60174 286 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 GNG11P61952 73 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 PFKPQ01813 784 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 NR1H3Q13133 447 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 KRT81Q14533 505 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 ANO4Q32M45 955 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 DCAF12L1Q5VU92 463 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 MFSD7Q6UXD7 560 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CIR1Q86X95 450 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CSGALNACT1Q8TDX6 532 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 WDR24Q96S15 920 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 ARHGEF4Q9NR80 690 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 PLK2Q9NYY3 685 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 CLEC4EQ9ULY5 219 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
CHMP2A-206ENST00000600118 TYW5A2RUC4 315 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 SHISA7A6NL88 538 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 DCLK1O15075 740 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 LUC7L3O95232 432 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 CISD3P0C7P0 127 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 PYGMP11217 842 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 ERCC2P18074 760 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 PTPN7P35236 360 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 ARL4AP40617 200 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 OPRD1P41143 372 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 COPS2P61201 443 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 PPP2R5EQ16537 467 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 IER5LQ5T953 404 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 CXorf57Q6NSI4 855 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
CHMP2A-206ENST00000600118 C12orf40Q86WS4 652 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms