RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ZNF143P52747 638 aaPredicted RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 NRLP54845 237 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 HDAC4P56524 1084 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 TBX2Q13207 712 aaPredicted RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 SRSF5Q13243 272 aaKnown RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 CDH18Q13634 790 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 FUT11Q495W5 492 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 HSF5Q4G112 596 aaPredicted RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 EOGTQ5NDL2 527 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 RABGAP1LQ5R372 815 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 ARTNQ5T4W7 220 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 DCUN1D2Q6PH85 259 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 STRADAQ7RTN6 431 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 ZNF683Q8IZ20 524 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 CHPFQ8IZ52 775 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 CCAR2Q8N163 923 aaKnown RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 CAMKK1Q8N5S9 505 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 TSTD1Q8NFU3 115 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 FAM126AQ9BYI3 521 aaPredicted RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 PARVAQ9NVD7 372 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 THAP10Q9P2Z0 257 aaPredicted RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 MYO1AQ9UBC5 1043 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 INTS6Q9UL03 887 aaKnown RBP15.71■□□□□ 0.11
LIG1-219ENST00000600055 PAXBP1Q9Y5B6 917 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 RAD54BQ9Y620 910 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 LILRB5O75023 590 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 MFAP3LO75121 409 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 CNTN5O94779 1100 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 APBB3O95704 486 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 TPM1P09493 284 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 HOXB2P14652 356 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 IL12RB1P42701 662 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 ZNF75DP51815 510 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 MTA1Q13330 715 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 ZNF234Q14588 700 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 MBLAC2Q68D91 279 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 KIAA1211LQ6NV74 962 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 ZC3H14Q6PJT7 736 aaKnown RBP15.7■□□□□ 0.1
LIG1-219ENST00000600055 TRMT11Q7Z4G4 463 aaKnown RBP15.7■□□□□ 0.1
LIG1-219ENST00000600055 VPS36Q86VN1 386 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 WDR5BQ86VZ2 330 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 LONP2Q86WA8 852 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 AHI1Q8N157 1196 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 CCDC185Q8N715 623 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 WFIKKN2Q8TEU8 576 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 UCMAQ8WVF2 138 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 HAPLN3Q96S86 360 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 TRIM7Q9C029 511 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 ABHD10Q9NUJ1 306 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 STON1Q9Y6Q2 735 aa15.7■□□□□ 0.1
LIG1-219ENST00000600055 A0A1B0GVM2 712 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 A0A1W2PQF6 199 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TCRBV21S2A2A0A5A6 115 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 ANKRD62A6NC57 917 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TCAF2A6NFQ2 919 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TMEM191CA6NGB0 347 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 PROB1E7EW31 1015 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 HRO43593 1189 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TIMM44O43615 452 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 SRGAP2O75044 1071 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 ADRA1BP35368 520 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 DGKEP52429 567 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 EIF4HQ15056 248 aaKnown RBP15.69■□□□□ 0.1
LIG1-219ENST00000600055 C5orf22Q49AR2 442 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 ALFQ53S48 1182 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 CCDC122Q5T0U0 273 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 ANO7Q6IWH7 933 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 CXorf57Q6NSI4 855 aaKnown RBP15.69■□□□□ 0.1
LIG1-219ENST00000600055 ALKBH5Q6P6C2 394 aaKnown RBP15.69■□□□□ 0.1
LIG1-219ENST00000600055 CCDC117Q8IWD4 279 aaPredicted RBP15.69■□□□□ 0.1
LIG1-219ENST00000600055 DRC7Q8IY82 874 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 APCDD1Q8J025 514 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 MDGA1Q8NFP4 955 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 OR52K2Q8NGK3 314 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 C1orf74Q96LT6 269 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 CHP1Q99653 195 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 GABRG3Q99928 467 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 CNPY3Q9BT09 278 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TPSD1Q9BZJ3 242 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 THAP2Q9H0W7 228 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 TMEM51Q9NW97 253 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 MPP6Q9NZW5 540 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 NENFQ9UMX5 172 aa15.69■□□□□ 0.1
LIG1-219ENST00000600055 DRGXA6NNA5 263 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 AKR1B15C9JRZ8 316 aaPredicted RBP15.68■□□□□ 0.1
LIG1-219ENST00000600055 E9PAM4 449 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 AXIN1O15169 862 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 HLA-EP13747 358 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 POLR2EP19388 210 aaKnown RBP15.68■□□□□ 0.1
LIG1-219ENST00000600055 PRKCHP24723 683 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 PSMA2P25787 234 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 MZF1P28698 734 aaPredicted RBP15.68■□□□□ 0.1
LIG1-219ENST00000600055 CSKP41240 450 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 CTSOP43234 321 aaPredicted RBP15.68■□□□□ 0.1
LIG1-219ENST00000600055 GFPT1Q06210 699 aaPredicted RBP15.68■□□□□ 0.1
LIG1-219ENST00000600055 ZNF252P-AS1Q0IIN9 211 aa15.68■□□□□ 0.1
LIG1-219ENST00000600055 PTPRNQ16849 979 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms