RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 GOLPH3LQ9H4A5 285 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 FTSJ1Q9UET6 329 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 FZD4Q9ULV1 537 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 TLR6Q9Y2C9 796 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 PCDHB4Q9Y5E5 795 aa17.65■□□□□ 0.42
PNKP-210ENST00000597965 A0A1W2PPC4 97 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 GOLGA8CPA6NN73 597 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 M0QYV0 167 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 PSMA7O14818 248 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 P4HA2O15460 535 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 NNMTP40261 264 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 CTSKP43235 329 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 FMO5P49326 533 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 LRMPQ12912 555 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 PNOCQ13519 176 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 BECN1Q14457 450 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 SMAD1Q15797 465 aaKnown RBP17.64■□□□□ 0.41
PNKP-210ENST00000597965 SLC45A4Q5BKX6 768 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 FAM133BQ5BKY9 247 aaKnown RBP17.64■□□□□ 0.41
PNKP-210ENST00000597965 RNF219Q5W0B1 726 aaPredicted RBP17.64■□□□□ 0.41
PNKP-210ENST00000597965 ANKRD40Q6AI12 368 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 PMF1Q6P1K2 205 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 PDZD3Q86UT5 571 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 UBR7Q8N806 425 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 SMARCE1Q969G3 411 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 CEP63Q96MT8 703 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 STIM2Q9P246 746 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 CEP83Q9Y592 693 aa17.64■□□□□ 0.41
PNKP-210ENST00000597965 EDDM13A0A1B0GTR0 161 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 HOXB3P14651 431 aaPredicted RBP17.63■□□□□ 0.41
PNKP-210ENST00000597965 SLC6A4P31645 630 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 HNF1BP35680 557 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 CSKP41240 450 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 ACADSBP45954 432 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 RGS7P49802 495 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 SGSHP51688 502 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 NUCB2P80303 420 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 CST6Q15828 149 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 BEND5Q7L4P6 421 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 TMPRSS12Q86WS5 348 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 PPM1KQ8N3J5 372 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 CARNMT1Q8N4J0 409 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 OR2T34Q8NGX1 318 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 PPP1R9BQ96SB3 815 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 ADAMTS1Q9UHI8 967 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 BTBD3Q9Y2F9 522 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 PCDHGA1Q9Y5H4 931 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 TMEM131Q92545 1883 aa17.63■□□□□ 0.41
PNKP-210ENST00000597965 LAMA5O15230 3695 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 FAM47DPA6NHR8 397 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 H0Y8X5 98 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 CAPN9O14815 690 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 ADH1BP00325 375 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 APOEP02649 317 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 C1SP09871 688 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 ABCB4P21439 1286 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 ARRB1P49407 418 aaPredicted RBP17.62■□□□□ 0.41
PNKP-210ENST00000597965 GALCP54803 685 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 GCNT1Q02742 428 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 SLC12A1Q13621 1099 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 COL28A1Q2UY09 1125 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 C19orf48Q6RUI8 117 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 SND1Q7KZF4 910 aaKnown RBP eCLIP17.62■□□□□ 0.41
PNKP-210ENST00000597965 WFDC5Q8TCV5 224 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 DHTKD1Q96HY7 919 aaPredicted RBP17.62■□□□□ 0.41
PNKP-210ENST00000597965 ELF4Q99607 663 aaPredicted RBP17.62■□□□□ 0.41
PNKP-210ENST00000597965 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 RAXQ9Y2V3 346 aa17.62■□□□□ 0.41
PNKP-210ENST00000597965 GOLGA4Q13439 2230 aaKnown RBP17.62■□□□□ 0.41
PNKP-210ENST00000597965 FASNP49327 2511 aaKnown RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 A0A1B0GTQ1 180 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 GOLGA6L7A0A1B0GV03 622 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 TRABD2BA6NFA1 517 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 SIN3BO75182 1162 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 RNASEH2AO75792 299 aaKnown RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 LUC7L3O95232 432 aaKnown RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 IGHV4-34P06331 123 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 C5AR1P21730 350 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 CCR5P51681 352 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 OXCT1P55809 520 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 ECT2LQ008S8 904 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 SULT2A1Q06520 285 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 MTA1Q13330 715 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 CCDC40Q4G0X9 1142 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 MS4A13Q5J8X5 152 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 NCEH1Q6PIU2 408 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 DHX40Q8IX18 779 aaKnown RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 SCUBE3Q8IX30 993 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 FMR1NBQ8N0W7 255 aaPredicted RBP17.61■□□□□ 0.41
PNKP-210ENST00000597965 OXR1Q8N573 874 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 SPATA20Q8TB22 786 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 FAM149B1Q96BN6 582 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 MYO19Q96H55 970 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 LMLNQ96KR4 655 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 MIS12Q9H081 205 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 GDF3Q9NR23 364 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 AASDHPPTQ9NRN7 309 aa17.61■□□□□ 0.41
PNKP-210ENST00000597965 SLC12A6Q9UHW9 1150 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms