RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CSKP41240 450 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 GABRB2P47870 512 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 RNASE9P60153 205 aaKnown RBP15.59■□□□□ 0.09
LIG1-215ENST00000597901 NME3Q13232 169 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 CDH18Q13634 790 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 SYCP2LQ5T4T6 812 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 TAF3Q5VWG9 929 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 CHSY1Q86X52 802 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 ERICH1Q86X53 443 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 ZDHHC17Q8IUH5 632 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 RGL4Q8IZJ4 473 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 CADM4Q8NFZ8 388 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 C18orf8Q96DM3 657 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 MTG2Q9H4K7 406 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 ANO10Q9NW15 660 aa15.59■□□□□ 0.09
LIG1-215ENST00000597901 METTL12A8MUP2 240 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 F5H5T6 163 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 M0QYT0 321 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 KCNK5O95279 499 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 ASLP04424 464 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 CFIP05156 583 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 MATKP42679 507 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 KLK7P49862 253 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 ST8SIA6P61647 398 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 RPS14P62263 151 aaKnown RBP15.58■□□□□ 0.08
LIG1-215ENST00000597901 GFPT1Q06210 699 aaPredicted RBP15.58■□□□□ 0.08
LIG1-215ENST00000597901 UAP1L1Q3KQV9 507 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 PITRM1Q5JRX3 1037 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 WDR45BQ5MNZ6 344 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 N4BP2L1Q5TBK1 243 aaPredicted RBP15.58■□□□□ 0.08
LIG1-215ENST00000597901 FBXL22Q6P050 247 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 NOP9Q86U38 636 aaKnown RBP15.58■□□□□ 0.08
LIG1-215ENST00000597901 APCDD1Q8J025 514 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 MYO19Q96H55 970 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 MRGPRX3Q96LB0 322 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 CNTNAP3BQ96NU0 1288 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 CNTNAP3Q9BZ76 1288 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 GANQ9H2C0 597 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 CAPN10Q9HC96 672 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 ERVW-1Q9UQF0 538 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 RALGAPA1Q6GYQ0 2036 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 SPAG17Q6Q759 2223 aa15.58■□□□□ 0.08
LIG1-215ENST00000597901 THADAQ6YHU6 1953 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 LRRC10BA6NIK2 292 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 F8VZ95 297 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 DAB1O75553 588 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 MOCS3O95396 460 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 TPM2P07951 284 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 CTSOP43234 321 aaPredicted RBP15.57■□□□□ 0.08
LIG1-215ENST00000597901 MAPK8P45983 427 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 POLR2FP61218 127 aaKnown RBP15.57■□□□□ 0.08
LIG1-215ENST00000597901 ZBTB16Q05516 673 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 MTA1Q13330 715 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 AUHQ13825 339 aaKnown RBP15.57■□□□□ 0.08
LIG1-215ENST00000597901 FKBP15Q5T1M5 1219 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 RABEPKQ7Z6M1 372 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 FAM124AQ86V42 546 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 CACUL1Q86Y37 369 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 CCAR2Q8N163 923 aaKnown RBP15.57■□□□□ 0.08
LIG1-215ENST00000597901 KDM1BQ8NB78 822 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 DNASE2BQ8WZ79 361 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 IGSF8Q969P0 613 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 NPY6RQ99463 290 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 FBRSQ9HAH7 460 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 FSCN3Q9NQT6 498 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 RRN3Q9NYV6 651 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.57■□□□□ 0.08
LIG1-215ENST00000597901 SLCO3A1Q9UIG8 710 aa15.57■□□□□ 0.08
LIG1-215ENST00000597901 FAM170AA1A519 330 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 ARHGAP33O14559 1287 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 PAGE1O75459 146 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 GFPT2O94808 682 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 SRPRAP08240 638 aaKnown RBP15.56■□□□□ 0.08
LIG1-215ENST00000597901 MMEP08473 750 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 GNSP15586 552 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 CXCR3P49682 368 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 COPB1P53618 953 aaKnown RBP15.56■□□□□ 0.08
LIG1-215ENST00000597901 ECT2LQ008S8 904 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 SLC12A1Q13621 1099 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
LIG1-215ENST00000597901 PLEKHG6Q3KR16 790 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 RABGAP1LQ5R372 815 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 C14orf80Q86SX3 495 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 XYLT1Q86Y38 959 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 CPA5Q8WXQ8 436 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 NT5C3BQ969T7 300 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 WDCPQ9H6R7 721 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 FAM207AQ9NSI2 230 aaPredicted RBP15.56■□□□□ 0.08
LIG1-215ENST00000597901 LIMA1Q9UHB6 759 aaKnown RBP15.56■□□□□ 0.08
LIG1-215ENST00000597901 HS3ST4Q9Y661 456 aa15.56■□□□□ 0.08
LIG1-215ENST00000597901 TARSL2A2RTX5 802 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 TTC34A8MYJ7 566 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 GIPC1O14908 333 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 SIN3BO75182 1162 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 ADCY5O95622 1261 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 LSM8O95777 96 aaKnown RBP15.55■□□□□ 0.08
LIG1-215ENST00000597901 MBD3O95983 291 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 F9P00740 461 aa15.55■□□□□ 0.08
LIG1-215ENST00000597901 DNTTP04053 509 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms