RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ABCB8Q9NUT2 735 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 ANAPC7Q9UJX3 599 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 A0A1B0GVM2 712 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 TCAF2A6NFQ2 919 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 CHURC1-FNTBB4DL54 471 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 PRRT4C9JH25 899 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 PABPC1P11940 636 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 HLA-FP30511 346 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 CYLC1P35663 651 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 CXCL12P48061 93 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 ANGPT1Q15389 498 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 EMC10Q5UCC4 262 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 RNF43Q68DV7 783 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 SLFN11Q7Z7L1 901 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 CCAR2Q8N163 923 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 ZNF513Q8N8E2 541 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 FIBINQ8TAL6 211 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 ZNF564Q8TBZ8 553 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 WFDC5Q8TCV5 224 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 UCMAQ8WVF2 138 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 IGSF8Q969P0 613 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 NTAN1Q96AB6 310 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 CTTNBP2NLQ9P2B4 639 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 GGA2Q9UJY4 613 aa20.29■□□□□ 0.84
SHKBP1-214ENST00000597396 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 ANTXRLA6NF34 631 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 E9PAM4 449 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 SRGAP2O75044 1071 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 TMEM253P0C7T8 217 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 KIR2DL1P43626 348 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 SATB1Q01826 763 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 ZNF252P-AS1Q0IIN9 211 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 EFHC2Q5JST6 749 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 CHST9Q7L1S5 443 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 TMTC1Q8IUR5 882 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 CCDC170Q8IYT3 715 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 AHI1Q8N157 1196 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 CCDC33Q8N5R6 958 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 NCAPGQ9BPX3 1015 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 CIPCQ9C0C6 399 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 IP6K2Q9UHH9 426 aa20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 ZFHX2Q9C0A1 2572 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-214ENST00000597396 KLF8O95600 359 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 CD70P32970 193 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 IRAK1P51617 712 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 AIF1P55008 147 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 LMAN2Q12907 356 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 PIGHQ14442 188 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 EIF4HQ15056 248 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 C5orf22Q49AR2 442 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 HSF5Q4G112 596 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 EGFLAMQ63HQ2 1017 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 MAMSTRQ6ZN01 415 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 TRMT11Q7Z4G4 463 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 ALLCQ8N6M5 410 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 TXNDC5Q8NBS9 432 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 KCNV2Q8TDN2 545 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 OSBPL2Q9H1P3 480 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 GRPEL1Q9HAV7 217 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 ZDHHC4Q9NPG8 344 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 KIAA1522Q9P206 1035 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 UVRAGQ9P2Y5 699 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 OR12D3Q9UGF7 316 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 SLC8A2Q9UPR5 921 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 STARD13Q9Y3M8 1113 aa20.27■□□□□ 0.84
SHKBP1-214ENST00000597396 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 MYO1FO00160 1098 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 PRPSAP2O60256 369 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 CLDN11O75508 207 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 MOCS3O95396 460 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 CDH4P55283 916 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 CSTF1Q05048 431 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 SCAPQ12770 1279 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 ZNF177Q13360 481 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 ACAP1Q15027 740 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 E2F5Q15329 346 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 SPA17Q15506 151 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 EOGTQ5NDL2 527 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 ZNF683Q8IZ20 524 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 IL17RCQ8NAC3 791 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 BTBD6Q96KE9 485 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 LUC7LQ9NQ29 371 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 PRMT8Q9NR22 394 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 ELOVL2Q9NXB9 296 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 PCSK1NQ9UHG2 260 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 FBXO4Q9UKT5 387 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 FZD10Q9ULW2 581 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 MMP17Q9ULZ9 603 aa20.26■□□□□ 0.83
SHKBP1-214ENST00000597396 IGLV3-10A0A075B6K4 115 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 SOWAHDA6NJG2 315 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 TIMM44O43615 452 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 CNTN5O94779 1100 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 IPO7O95373 1038 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 POLR2EP19388 210 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 FECHP22830 423 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 MIPP30301 263 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 MAGEA1P43355 309 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 OXCT1P55809 520 aa20.25■□□□□ 0.83
SHKBP1-214ENST00000597396 NRG1Q02297 640 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms