RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 FGF10O15520 208 aaPredicted RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 LIASO43766 372 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 CNTN5O94779 1100 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 RHOQP17081 205 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 MTHFRP42898 656 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 NR2C2P49116 596 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 IRAK1P51617 712 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 EIF3EP60228 445 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 TUBB4BP68371 445 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 GBE1Q04446 702 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 ALFQ53S48 1182 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 TTC27Q6P3X3 843 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 CCDC137Q6PK04 289 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 GET4Q7L5D6 327 aaPredicted RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 NLRP14Q86W24 1093 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 BBS7Q8IWZ6 715 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 FAM217AQ8IXS0 508 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 RTL3Q8N8U3 475 aaKnown RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 TTC16Q8NEE8 873 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 MYRIPQ8NFW9 859 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 ATL2Q8NHH9 583 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 ZSCAN18Q8TBC5 510 aaPredicted RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 FGF13Q92913 245 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 RIPOR3Q96MK2 946 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 RPRD1AQ96P16 312 aaPredicted RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 DTLQ9NZJ0 730 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 DNPEPQ9ULA0 475 aa11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 ZFP37Q9Y6Q3 630 aaPredicted RBP11.79□□□□□ -0.52
SH2D3A-205ENST00000597168 HELZP42694 1942 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 GFRA2O00451 464 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 TSPAN3O60637 253 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 MAP3K6O95382 1288 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 RBP3P10745 1247 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CHKAP35790 457 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 PTGIRP43119 386 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 FNTAP49354 379 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 XRCC4Q13426 336 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 OASLQ15646 514 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 ZNF77Q15935 545 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 GLE1Q53GS7 698 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CCDC105Q8IYK2 499 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CPXM2Q8N436 756 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 LZTR1Q8N653 840 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CELF5Q8N6W0 485 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 NETO2Q8NC67 525 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 RIN3Q8TB24 985 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 MYLIPQ8WY64 445 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 UBXN4Q92575 508 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 TMA16Q96EY4 203 aaKnown RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 ASB16Q96NS5 453 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CDX2Q99626 313 aaPredicted RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 RETREG1Q9H6L5 497 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 GDE1Q9NZC3 331 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 AMACRQ9UHK6 382 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 SZT2Q5T011 3432 aa11.78□□□□□ -0.52
SH2D3A-205ENST00000597168 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 H7C0C1 242 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 MCF2LO15068 1137 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 RAD51CO43502 376 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 MFSD11O43934 449 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 SERPINB6P35237 376 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 ATP5OP48047 213 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 SGSHP51688 502 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 CDH4P55283 916 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 RPS24P62847 133 aaKnown RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 MRPS25P82663 173 aaKnown RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 USP4Q13107 963 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 BYSLQ13895 437 aaKnown RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 CCDC85BQ15834 202 aaPredicted RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 ERCC6LQ2NKX8 1250 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 FAM78AQ5JUQ0 283 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 RABGAP1LQ5R372 815 aa11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.53
SH2D3A-205ENST00000597168 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms