RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, human

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF43-208	ENST00000596899	MLLT3	P42568	568 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	CASP5	P51878	434 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	RIPPLY3	P57055	190 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	OVGP1	Q12889	678 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	STAT4	Q14765	748 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TGIF1	Q15583	401 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	MPPE1	Q53F39	396 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3G	Q6DHY5	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3C	Q6IPX1	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	PRPF39	Q86UA1	669 aa	Known RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	FAM217A	Q8IXS0	508 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	WDR36	Q8NI36	951 aa	Known RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	ARRDC3	Q96B67	414 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	AK8	Q96MA6	479 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	SEL1L	Q9UBV2	794 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	PCDHA5	Q9Y5H7	936 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899		U3KQA8	63 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	LRRK1	Q38SD2	2015 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	CACNA1D	Q01668	2161 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	NBAS	A2RRP1	2371 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	ABCA12	Q86UK0	2595 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	ITGA2B	P08514	1039 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	DLAT	P10515	647 aa	Known RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	TNNI1	P19237	187 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	POLR2E	P19388	210 aa	Known RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	MAT2A	P31153	395 aa	Known RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	SLC8A1	P32418	973 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	PSMD8	P48556	350 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	PSEN1	P49768	467 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	MYL6	P60660	151 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	CLCA4	Q14CN2	919 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	SCARA5	Q6ZMJ2	495 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	RBM44	Q6ZP01	1051 aa	Known RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	SCD5	Q86SK9	330 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	AADAT	Q8N5Z0	425 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	FAM184A	Q8NB25	1140 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	CAAP1	Q9H8G2	361 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	USP29	Q9HBJ7	922 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	FAM49B	Q9NUQ9	324 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	NLGN3	Q9NZ94	848 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	ARHGAP20	Q9P2F6	1191 aa		13.54	□□□□□ -0.24
ZNF43-208	ENST00000596899	HHLA1	C9JL84	531 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	KIAA0391	O15091	583 aa	Known RBP	13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	NOBOX	O60393	691 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	STAU1	O95793	577 aa	Known RBP	13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	FAM200B	P0CF97	657 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	GOT1	P17174	413 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	ADORA2B	P29275	332 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	NEK4	P51957	841 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	ST8SIA6	P61647	398 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	TRPC3	Q13507	836 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	POM121L1P	Q3SYA9	428 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	CLEC20A	Q6ZU45	233 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	ZNF276	Q8N554	614 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	KLHDC7B	Q96G42	594 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	MYO19	Q96H55	970 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	XYLT2	Q9H1B5	865 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	CA5B	Q9Y2D0	317 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	PCDHB13	Q9Y5F0	798 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	PCDHGA4	Q9Y5G9	962 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	UBE4B	O95155	1302 aa		13.53	□□□□□ -0.24
ZNF43-208	ENST00000596899	CCDC187	A0A096LP49	1063 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	SLC12A8	A0AV02	714 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	PIAS2	O75928	621 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	GAP43	P17677	238 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	SLC5A2	P31639	672 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CD70	P32970	193 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CASR	P41180	1078 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	HARS2	P49590	506 aa	Known RBP	13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CYP4F2	P78329	520 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	KCNMA1	Q12791	1236 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	NCAPH	Q15003	741 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CDKN3	Q16667	212 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	RILPL1	Q5EBL4	403 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CRTC1	Q6UUV9	634 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	C14orf80	Q86SX3	495 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	WFDC5	Q8TCV5	224 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	SYAP1	Q96A49	352 aa	Predicted RBP	13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CGRRF1	Q99675	332 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	LLPH	Q9BRT6	129 aa	Known RBP	13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	FGFBP2	Q9BYJ0	223 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	SDCBP2	Q9H190	292 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CLIC5	Q9NZA1	410 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	MARCH2	Q9P0N8	246 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	CYTH4	Q9UIA0	394 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	STRIP2	Q9ULQ0	834 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	DMTF1	Q9Y222	760 aa		13.52	□□□□□ -0.25
ZNF43-208	ENST00000596899	RP1	P56715	2156 aa		13.51	□□□□□ -0.25
ZNF43-208	ENST00000596899	SCN8A	Q9UQD0	1980 aa		13.51	□□□□□ -0.25
ZNF43-208	ENST00000596899	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms