RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 AREL1O15033 823 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 BNIP2Q12982 314 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 GRB10Q13322 594 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 NFYCQ13952 458 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SHROOM1Q2M3G4 852 aaPredicted RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SLC5A5Q92911 643 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 MTG1Q9BT17 334 aaPredicted RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 NCANO14594 1321 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 TMEM191CA6NGB0 347 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 LMBRD2Q68DH5 695 aaPredicted RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 FBXO39Q8N4B4 442 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 POLR1EQ9GZS1 481 aaKnown RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 NFAT5O94916 1531 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 EPN2O95208 641 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SERPIND1P05546 499 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 CKBP12277 381 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 PTPN21Q16825 1174 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 CTXN3Q4LDR2 81 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 IFNEQ86WN2 208 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 PHACTR4Q8IZ21 702 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 OR1G1P47890 313 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 ITGADQ13349 1161 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 DHFR2Q86XF0 187 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 NSMCE2Q96MF7 247 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 IDI2Q9BXS1 227 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
FARP1-219ENST00000596580 DGKAP23743 735 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 R3HCC1LQ7Z5L2 792 aaKnown RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 HSFY1Q96LI6 401 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 RIC1Q4ADV7 1423 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 H3BNX3 289 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 ASGR1P07306 291 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 THPOP40225 353 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 CYP2A13Q16696 494 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 ARMC4Q5T2S8 1044 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 ARMC3Q5W041 872 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 USP45Q70EL2 814 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 PIWIL4Q7Z3Z4 852 aaKnown RBP8.18□□□□□ -1.1
FARP1-219ENST00000596580 ZNF670Q9BS34 389 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SMURF2Q9HAU4 748 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 VPS45Q9NRW7 570 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SNX6Q9UNH7 406 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 MYRFQ9Y2G1 1151 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 SQORQ9Y6N5 450 aa8.18□□□□□ -1.1
FARP1-219ENST00000596580 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 SEC23AQ15436 765 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 ALG13Q9NP73 1137 aaKnown RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 AKAP7Q9P0M2 348 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 CHORDC1Q9UHD1 332 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 ZMYM5Q9UJ78 669 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 NRCAMQ92823 1304 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 SEC24DO94855 1032 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 SLC1A6P48664 564 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 INHBEP58166 350 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 LAMTOR4Q0VGL1 99 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 NR6A1Q15406 480 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 OSBPL10Q9BXB5 764 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 GPD2P43304 727 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 ERVK-24P63145 666 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 DNAJB7Q7Z6W7 309 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 SH2D3CQ8N5H7 860 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 TBL1YQ9BQ87 522 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 CHST12Q9NRB3 414 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 ACO1P21399 889 aaKnown RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 PMS1P54277 932 aaKnown RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 CCDC149Q6ZUS6 474 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 GLMNQ92990 594 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 OXNAD1Q96HP4 312 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 MRPL57Q9BQC6 102 aaKnown RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 RCOR3Q9P2K3 495 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 SFMBT1Q9UHJ3 866 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 GNPTGQ9UJJ9 305 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 PIPSLA2A3N6 862 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 RGS5O15539 181 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 RIPK2O43353 540 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 GRAP2O75791 330 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 PDE5AO76074 875 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 DEPDC4Q8N2C3 294 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 C3orf18Q9UK00 162 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 NDUFAF1Q9Y375 327 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 FAM237AA0A1B0GTK4 181 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 LDLRP01130 860 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 MBL2P11226 248 aaPredicted RBP8.17□□□□□ -1.1
FARP1-219ENST00000596580 ME2P23368 584 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 RHOAP61586 193 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 GALNTL6Q49A17 601 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 TXNDC11Q6PKC3 985 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 PTF1AQ7RTS3 328 aa8.17□□□□□ -1.1
FARP1-219ENST00000596580 RORBQ92753 470 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms