RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 GGA2Q9UJY4 613 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 FBXO10Q9UK96 956 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 R4GN57 208 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 CACNA1IQ9P0X4 2223 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 ACACBO00763 2458 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 TCRBV5S1A1TA0A578 114 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 CHURC1-FNTBB4DL54 471 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 SGK1O00141 431 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 GFRA2O00451 464 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 LMNAP02545 664 aaKnown RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 PSMA2P25787 234 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 HLA-FP30511 346 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 CD70P32970 193 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 PTPN9P43378 593 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 FNTBP49356 437 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 NRLP54845 237 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 DMWDQ09019 674 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 TBX2Q13207 712 aaPredicted RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 CDH18Q13634 790 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 ARL13BQ3SXY8 428 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 SDE2Q6IQ49 451 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 FBXL22Q6P050 247 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 ALKBH5Q6P6C2 394 aaKnown RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 LRRC31Q6UY01 552 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 UCMAQ8WVF2 138 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 SORCS1Q8WY21 1168 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 TRIM11Q96F44 468 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 ACOX2Q99424 681 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 PRMT1Q99873 361 aaKnown RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 MAGEB5Q9BZ81 275 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 THAP2Q9H0W7 228 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 PRMT8Q9NR22 394 aaPredicted RBP11.45□□□□□ -0.58
LIG1-211ENST00000596457 MMP17Q9ULZ9 603 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 PCDHGA2Q9Y5H1 932 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 VPS13AQ96RL7 3174 aa11.45□□□□□ -0.58
LIG1-211ENST00000596457 WASH3PC4AMC7 463 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 I6L893 689 aaPredicted RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 ENDOD1O94919 500 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 LUC7L3O95232 432 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 MYBL1P10243 752 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 PABPC1P11940 636 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 POLR2EP19388 210 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 NTSR1P30989 418 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 HNRNPH3P31942 346 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 ADRA1BP35368 520 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 IRAK1P51617 712 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 DGKEP52429 567 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 ZNF143P52747 638 aaPredicted RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 OGDHQ02218 1023 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 LMAN2Q12907 356 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 FSCBQ5H9T9 825 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 EOGTQ5NDL2 527 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 MPP7Q5T2T1 576 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 MBLAC2Q68D91 279 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 PLEKHA7Q6IQ23 1121 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 SYT13Q7L8C5 426 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 STRADAQ7RTN6 431 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 TRMT11Q7Z4G4 463 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 CHPFQ8IZ52 775 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 CCAR2Q8N163 923 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 CCDC185Q8N715 623 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 TSTD1Q8NFU3 115 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 FIBINQ8TAL6 211 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 CYB5D2Q8WUJ1 264 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 ATRIPQ8WXE1 791 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 MRFAP1L1Q96HT8 127 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 IRX2Q9BZI1 471 aaPredicted RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 TRIM7Q9C029 511 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 NHEJ1Q9H9Q4 299 aaPredicted RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
LIG1-211ENST00000596457 ZSCAN32Q9NX65 697 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 ELOVL2Q9NXB9 296 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 CACNA2D2Q9NY47 1150 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 PCSK1NQ9UHG2 260 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 HCN2Q9UL51 889 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 SLC27A6Q9Y2P4 619 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 RAD54BQ9Y620 910 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 SCINQ9Y6U3 715 aa11.44□□□□□ -0.58
LIG1-211ENST00000596457 GVINP1Q7Z2Y8 2422 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 TMEM191CA6NGB0 347 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 E9PAM4 449 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 K7ESF4 209 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 CNTN5O94779 1100 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 MOCS3O95396 460 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 HOXB2P14652 356 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 GALCP54803 685 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 HDAC4P56524 1084 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 MTA1Q13330 715 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 ZNF177Q13360 481 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms