RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PRKCHP24723 683 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 HNRNPH3P31942 346 aaKnown RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 RDXP35241 583 aaKnown RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 IL12RB1P42701 662 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 NUMBP49757 651 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 NRLP54845 237 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 HDAC4P56524 1084 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 ZNF234Q14588 700 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CDO1Q16878 200 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 FUT11Q495W5 492 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 PREPLQ4J6C6 727 aaPredicted RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 ALFQ53S48 1182 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 EOGTQ5NDL2 527 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 MBLAC2Q68D91 279 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 SPECC1LQ69YQ0 1117 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 ANO7Q6IWH7 933 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CHST9Q7L1S5 443 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 MFN1Q8IWA4 741 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CHPFQ8IZ52 775 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 APCDD1Q8J025 514 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 ARFGAP1Q8N6T3 406 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 FRMD1Q8N878 549 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 MDGA1Q8NFP4 955 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 TSTD1Q8NFU3 115 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CCDC26Q8TAB7 109 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
VRK3-210ENST00000596121 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 TPSD1Q9BZJ3 242 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 CIPCQ9C0C6 399 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 EPC1Q9H2F5 836 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 ADAMTS1Q9UHI8 967 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 SLC12A6Q9UHW9 1150 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 INVSQ9Y283 1065 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 STON1Q9Y6Q2 735 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 GVINP1Q7Z2Y8 2422 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 FRYLO94915 3013 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
VRK3-210ENST00000596121 EML5Q05BV3 1969 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CCDC163A0A0D9SF12 145 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 TCRBV21S2A2A0A5A6 115 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 DRGXA6NNA5 263 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 FAM72CH0Y354 149 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 AXIN1O15169 862 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CBFA2T2O43439 604 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 RTN2O75298 545 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 F9P00740 461 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 GZMAP12544 262 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 HLA-EP13747 358 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 HOXB2P14652 356 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 GABRG2P18507 467 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 GPD1P21695 349 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 MZF1P28698 734 aaPredicted RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 HOXD11P31277 338 aaPredicted RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 SDC4P31431 198 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 ADRA1BP35368 520 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CSKP41240 450 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CTSOP43234 321 aaPredicted RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 DGKEP52429 567 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 TBX2Q13207 712 aaPredicted RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 LPAL2Q16609 132 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 FAM72AQ5TYM5 149 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 FAM72DQ6L9T8 149 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CXorf57Q6NSI4 855 aaKnown RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 SARM1Q6SZW1 724 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 FAM72BQ86X60 149 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 FAM172AQ8WUF8 416 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 TTC17Q96AE7 1141 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 ALG14Q96F25 216 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 MYO19Q96H55 970 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 VCPIP1Q96JH7 1222 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 MRGPRX3Q96LB0 322 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 C1orf74Q96LT6 269 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 RPRD1AQ96P16 312 aaPredicted RBP11.51□□□□□ -0.57
VRK3-210ENST00000596121 DNAJC7Q99615 494 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 TMEM245Q9H330 911 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 ZNF212Q9UDV6 495 aa11.51□□□□□ -0.57
VRK3-210ENST00000596121 IGLV3-10A0A075B6K4 115 aa11.5□□□□□ -0.57
VRK3-210ENST00000596121 TMEM191CA6NGB0 347 aa11.5□□□□□ -0.57
VRK3-210ENST00000596121 TIMM44O43615 452 aa11.5□□□□□ -0.57
VRK3-210ENST00000596121 GFRA3O60609 400 aa11.5□□□□□ -0.57
VRK3-210ENST00000596121 LMNAP02545 664 aaKnown RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 ZNF143P52747 638 aaPredicted RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 ADKP55263 362 aaKnown RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 EIF4HQ15056 248 aaKnown RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 ASTE1Q2TB18 679 aaPredicted RBP11.5□□□□□ -0.57
VRK3-210ENST00000596121 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms