RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 P2RY11Q96G91 374 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 EPAS1Q99814 870 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ZNF358Q9NW07 568 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 TMEM216Q9P0N5 145 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 MLNP12872 115 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PGAM1P18669 254 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ARRB2P32121 409 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 BCAT1P54687 386 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PITX1P78337 314 aaPredicted RBP16.93■□□□□ 0.3
LIG1-206ENST00000594067 HIC1Q14526 733 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 RALGPS1Q5JS13 557 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ZNF618Q5T7W0 954 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 ACAD11Q709F0 780 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 CCNYQ8ND76 341 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 OR6Y1Q8NGX8 325 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PYDC1Q8WXC3 89 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 PGBD4Q96DM1 585 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 SORCS3Q9UPU3 1222 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 SERPINE1P05121 402 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 SULT1E1P49888 294 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 LAMB3Q13751 1172 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 LRRC36Q1X8D7 754 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 TAPT1Q6NXT6 567 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 DHDDSQ86SQ9 333 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 DEFB106AQ8N104 65 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 SNX27Q96L92 541 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 C16orf70Q9BSU1 422 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 DCDC2Q9UHG0 476 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 FZD10Q9ULW2 581 aa16.93■□□□□ 0.3
LIG1-206ENST00000594067 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
LIG1-206ENST00000594067 ASB14A6NK59 587 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 HACD1B0YJ81 288 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 SIN3BO75182 1162 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 PROCP04070 461 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 TYK2P29597 1187 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 IREB2P48200 963 aaKnown RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 PDCD2Q16342 344 aaPredicted RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 SFT2D3Q587I9 215 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 EFHC1Q5JVL4 640 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 UNC93AQ86WB7 457 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 ERO1BQ86YB8 467 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 TP53INP2Q8IXH6 220 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 BEST2Q8NFU1 509 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 PPP1R13LQ8WUF5 828 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 ATXN7L3BQ96GX2 97 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 SORT1Q99523 831 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 GTF2IRD1Q9UHL9 959 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 CITO14578 2027 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 H3BRB1 525 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 ADCY6O43306 1168 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 CREB3O43889 395 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 SORBS2O94875 1100 aaKnown RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 ADCYAP1R1P41586 468 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 IDH3AP50213 366 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 DBN1Q16643 649 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 CFAP157Q5JU67 520 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 C9orf57Q5W0N0 161 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 CMC1Q7Z7K0 106 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 GPC2Q8N158 579 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 NME8Q8N427 588 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 KBTBD7Q8WVZ9 684 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 HAPLN3Q96S86 360 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 TUT1Q9H6E5 874 aaKnown RBP16.92■□□□□ 0.3
LIG1-206ENST00000594067 TXNDC16Q9P2K2 825 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 SLC4A7Q9Y6M7 1214 aa16.92■□□□□ 0.3
LIG1-206ENST00000594067 KLHL2O95198 593 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 GTF2A2P52657 109 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 EPHB1P54762 984 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 ASPHQ12797 758 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 MSLNQ13421 630 aaPredicted RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 ITGA9Q13797 1035 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 ZBTB6Q15916 424 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 GRIK4Q16099 956 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 DCAF4L1Q3SXM0 396 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 MARCH8Q5T0T0 291 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 STRADAQ7RTN6 431 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 SIKE1Q9BRV8 207 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 CENPKQ9BS16 269 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 FAM49AQ9H0Q0 323 aaPredicted RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 MROH8Q9H579 483 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 ADAMTS6Q9UKP5 1117 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 CXCL11O14625 94 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 CCNT2O60583 730 aaKnown RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 STK10O94804 968 aaKnown RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 CYP2C8P10632 490 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 PIM1P11309 404 aaPredicted RBP16.91■□□□□ 0.3
LIG1-206ENST00000594067 AKAP5P24588 427 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 LPCAT4Q643R3 524 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms