RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
PNKP-202ENST00000593706 OSGEPQ9NPF4 335 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 TOR4AQ9NXH8 423 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 STIM2Q9P246 746 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 NCKAP1Q9Y2A7 1128 aa15.31■□□□□ 0.04
PNKP-202ENST00000593706 FAM47DPA6NHR8 397 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 IRAK2O43187 625 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 FMO5P49326 533 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 C21orf59P57076 290 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 IL9RQ01113 521 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 PAK1Q13153 545 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 CAMK4Q16566 473 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 PIK3R6Q5UE93 754 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 TMEM270Q6UE05 265 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 KIAA0907Q7Z7F0 614 aaPredicted RBP15.3■□□□□ 0.04
PNKP-202ENST00000593706 PDZD3Q86UT5 571 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 CCDC117Q8IWD4 279 aaPredicted RBP15.3■□□□□ 0.04
PNKP-202ENST00000593706 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 SCML4Q8N228 414 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 HJURPQ8NCD3 748 aaPredicted RBP15.3■□□□□ 0.04
PNKP-202ENST00000593706 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 IRGQQ8WZA9 623 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 FTSJ1Q9UET6 329 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 SUN2Q9UH99 717 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 KIAA1257Q9ULG3 409 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 RAXQ9Y2V3 346 aa15.3■□□□□ 0.04
PNKP-202ENST00000593706 GOLGA6L7A0A1B0GV03 622 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 BICDL2A1A5D9 508 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 KCNK3O14649 394 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 TNFSF14O43557 240 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 ACSL4O60488 711 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 LTFP02788 710 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 SLC6A4P31645 630 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 TBX4P57082 545 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 CDH18Q13634 790 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 FAM133BQ5BKY9 247 aaKnown RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 MPP7Q5T2T1 576 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 LCLAT1Q6UWP7 414 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 DBX2Q6ZNG2 339 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 PPM1KQ8N3J5 372 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 CARNMT1Q8N4J0 409 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 ACE2Q9BYF1 805 aaPredicted RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 IRX2Q9BZI1 471 aaPredicted RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 RSPH9Q9H1X1 276 aaPredicted RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 PABPC3Q9H361 631 aaKnown RBP15.29■□□□□ 0.04
PNKP-202ENST00000593706 CLSTN2Q9H4D0 955 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 MTG2Q9H4K7 406 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 FBXL12Q9NXK8 326 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 SCML1Q9UN30 329 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 PCDHB4Q9Y5E5 795 aa15.29■□□□□ 0.04
PNKP-202ENST00000593706 ARID1BQ8NFD5 2236 aaPredicted RBP15.28■□□□□ 0.04
PNKP-202ENST00000593706 H0Y8X5 98 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 PCDHGA12O60330 932 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 SIN3BO75182 1162 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 DKK1O94907 266 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 ASLP04424 464 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 PAEPP09466 180 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 CSKP41240 450 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 CTSKP43235 329 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 STX17P56962 302 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 SFSWAPQ12872 951 aaKnown RBP15.28■□□□□ 0.04
PNKP-202ENST00000593706 STILQ15468 1287 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 PKDCCQ504Y2 493 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 KIAA0895LQ68EN5 471 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 PMF1Q6P1K2 205 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 USP30Q70CQ3 517 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 MARCH9Q86YJ5 346 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 DHX40Q8IX18 779 aaKnown RBP15.28■□□□□ 0.04
PNKP-202ENST00000593706 CLEC4CQ8WTT0 213 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
PNKP-202ENST00000593706 TFAP2BQ92481 460 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 SKA1Q96BD8 255 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 PRICKLE1Q96MT3 831 aaPredicted RBP15.28■□□□□ 0.04
PNKP-202ENST00000593706 OMDQ99983 421 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 KALRNO60229 2985 aa15.28■□□□□ 0.04
PNKP-202ENST00000593706 FAM149AA5PLN7 773 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 LRRC72A6NJI9 287 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 P4HA2O15460 535 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 DFNA5O60443 496 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 RNASEH2AO75792 299 aaKnown RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 FBXO21O94952 628 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 MOCS2O96007 188 aaPredicted RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 IGHV4-34P06331 123 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 C7P10643 843 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 BRD2P25440 801 aaKnown RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 CST6Q15828 149 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 HNRNPA1L2Q32P51 320 aaKnown RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 CCDC40Q4G0X9 1142 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 RNF219Q5W0B1 726 aaPredicted RBP15.27■□□□□ 0.04
PNKP-202ENST00000593706 NADSYN1Q6IA69 706 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 FIBINQ8TAL6 211 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 SLC35F5Q8WV83 523 aa15.27■□□□□ 0.04
PNKP-202ENST00000593706 FAM149B1Q96BN6 582 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms