RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 QTRT1Q9BXR0 403 aaKnown RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 RNF26Q9BY78 433 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 TP63Q9H3D4 680 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC134Q9H6E4 229 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 NRIP3Q9NQ35 241 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 ASNSD1Q9NWL6 643 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 DACT1Q9NYF0 836 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 KLHL13Q9P2N7 655 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 PLCH2O75038 1416 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 BLMP54132 1417 aaPredicted RBP5.54□□□□□ -1.52
SMAD4-216ENST00000593223 NWD1Q149M9 1564 aa5.54□□□□□ -1.52
SMAD4-216ENST00000593223 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 SPATA31A1Q5TZJ5 1347 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 M0QZQ0 153 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 SYT5O00445 386 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 TRIM38O00635 465 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 RPP40O75818 363 aaKnown RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 LATS1O95835 1130 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 CELA2AP08217 269 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 GALNT1Q10472 559 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 PDCD2Q16342 344 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC174Q6PII3 467 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 KLHL17Q6TDP4 642 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 C16orf89Q6UX73 402 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 TRABD2AQ86V40 505 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 CCDC117Q8IWD4 279 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 SRRM1Q8IYB3 904 aaKnown RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 GALNT16Q8N428 558 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 MCRS1Q96EZ8 462 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 BRD8Q9H0E9 1235 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 CDCP1Q9H5V8 836 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 MAP3K20Q9NYL2 800 aaKnown RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 HERC5Q9UII4 1024 aaKnown RBP5.53□□□□□ -1.52
SMAD4-216ENST00000593223 NFU1Q9UMS0 254 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 FGD6Q6ZV73 1430 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 ABCC1P33527 1531 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 CAMTA1Q9Y6Y1 1673 aa5.53□□□□□ -1.52
SMAD4-216ENST00000593223 REREQ9P2R6 1566 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 KIF28PB7ZC32 967 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 PRR35P0CG20 571 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 GYS1P13807 737 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 KELP23276 732 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 NDUFS1P28331 727 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 AGTR2P50052 363 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 POLE2P56282 527 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 RNASELQ05823 741 aaKnown RBP5.52□□□□□ -1.53
SMAD4-216ENST00000593223 FAM110CQ1W6H9 321 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 BTBD16Q32M84 506 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
SMAD4-216ENST00000593223 PDILTQ8N807 584 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 GLMPQ8WWB7 406 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 ARPC5LQ9BPX5 153 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 PAAF1Q9BRP4 392 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 RTKNQ9BST9 563 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 ELOVL1Q9BW60 279 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 KATNAL1Q9BW62 490 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 TRIM2Q9C040 744 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 PI4KBQ9UBF8 816 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 NRBP1Q9UHY1 535 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 SIRT4Q9Y6E7 314 aaPredicted RBP5.52□□□□□ -1.53
SMAD4-216ENST00000593223 TMEM94Q12767 1356 aa5.52□□□□□ -1.53
SMAD4-216ENST00000593223 SCAF11Q99590 1463 aaKnown RBP5.51□□□□□ -1.53
SMAD4-216ENST00000593223 RTEL1-TNFRSF6BF6WH68 1400 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 IQGAP1P46940 1657 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 GXYLT2A0PJZ3 443 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 CGB1A6NKQ9 187 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 KCNU1A8MYU2 1149 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 ACKR2O00590 384 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 PPP6R2O75170 966 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 ACTL6BO94805 426 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 HOXD12P35452 270 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 CHKAP35790 457 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SERPINF1P36955 418 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 TRAPPC10P48553 1259 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 YPEL5P62699 121 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 GHRHRQ02643 423 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 GAB1Q13480 694 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 RAPGEF1Q13905 1077 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 RPS6KA2Q15349 733 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SEC23BQ15437 767 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 AAK1Q2M2I8 961 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SUPT20HL1Q3ZLR7 823 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 MTX3Q5HYI7 312 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 ANO7Q6IWH7 933 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 WDR93Q6P2C0 686 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 NEK8Q86SG6 692 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 UEVLDQ8IX04 471 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SRFBP1Q8NEF9 429 aaKnown RBP5.51□□□□□ -1.53
SMAD4-216ENST00000593223 HMGB4Q8WW32 186 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 PIGKQ92643 395 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SECISBP2LQ93073 1101 aaKnown RBP5.51□□□□□ -1.53
SMAD4-216ENST00000593223 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 RAB21Q9UL25 225 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 ABCA6Q8N139 1617 aa5.51□□□□□ -1.53
SMAD4-216ENST00000593223 CLTCQ00610 1675 aaKnown RBP5.5□□□□□ -1.53
SMAD4-216ENST00000593223 DEPDC5O75140 1603 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms