RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 IFT74Q96LB3 600 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 TMEM74Q96NL1 305 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 RANBP9Q96S59 729 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 TARS2Q9BW92 718 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 CIPCQ9C0C6 399 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 NEUROG2Q9H2A3 272 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 CHST11Q9NPF2 352 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 SLAMF7Q9NQ25 335 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 CROTQ9UKG9 612 aa9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 UBQLN1Q9UMX0 589 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-218ENST00000592158 A0A1W2PP55 124 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 D6RAR5 112 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 CYB561D2O14569 222 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 RFPL1O75677 317 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ITGB3P05106 788 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 VAV1P15498 845 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 CYP3A5P20815 502 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 RPA1P27694 616 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 CCT6AP40227 531 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 PPP3CCP48454 512 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 EFNA5P52803 228 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ARID5AQ03989 594 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 GNL2Q13823 731 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 PDIA5Q14554 519 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 POM121L1PQ3SYA9 428 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 VWA2Q5GFL6 755 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 TTC38Q5R3I4 469 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ZNF776Q68DI1 518 aaPredicted RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 NXPE1Q8N323 547 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 Q8NA96 180 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 GOLGA1Q92805 767 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 NAT6Q93015 286 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 TMEM159Q96B96 161 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 GFM1Q96RP9 751 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ACO2Q99798 780 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 B3GNT4Q9C0J1 378 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 BHMT2Q9H2M3 363 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 PABPC3Q9H361 631 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 GPN2Q9H9Y4 310 aaPredicted RBP9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 FBRSQ9HAH7 460 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 PRSS16Q9NQE7 514 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 SALL4Q9UJQ4 1053 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 VPS13CQ709C8 3753 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
SMARCA4-218ENST00000592158 ANK2Q01484 3957 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 SLC12A8A0AV02 714 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 CCDC169A6NNP5 214 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 COCHO43405 550 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 LATO43561 262 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 F9P00740 461 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 NEFLP07196 543 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 MCF2P10911 925 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 TCN2P20062 427 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PDCP20941 246 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PAX3P23760 479 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 NOS2P35228 1153 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 ARSDP51689 593 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PPP2CBP62714 309 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PPP2CAP67775 309 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 ECM1Q16610 540 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 DENND5BQ6ZUT9 1274 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PRPF39Q86UA1 669 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 CCDC83Q8IWF9 413 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PTPRN2Q92932 1015 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 C8orf76Q96K31 380 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 HAPLN3Q96S86 360 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 CMKLR1Q99788 373 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 PYM1Q9BRP8 204 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.931e-7■■■■■ 200.6
SMARCA4-218ENST00000592158 DDX19AQ9NUU7 478 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 TPX2Q9ULW0 747 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 SCML1Q9UN30 329 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 MYO7BQ6PIF6 2116 aa9.23□□□□□ -0.93
SMARCA4-218ENST00000592158 A0A0B4J269 797 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 XPOTO43592 962 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 RAD1O60671 282 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 RNASEH2AO75792 299 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 CXCL8P10145 99 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 HTR1EP28566 365 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 CCL7P80098 99 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 MC1RQ01726 317 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 TAF10Q12962 218 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 EIF4HQ15056 248 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 CCDC142Q17RM4 750 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 DEFB133Q30KQ1 61 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 FNDC3BQ53EP0 1204 aaKnown RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 ZNF542PQ5EBM4 170 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 ZNF438Q7Z4V0 828 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 ANKS1BQ7Z6G8 1248 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 SPATA2LQ8IUW3 424 aaPredicted RBP9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
SMARCA4-218ENST00000592158 STARD8Q92502 1023 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms