RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 OLIG1Q8TAK6 271 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 SLC35F5Q8WV83 523 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 RSAD2Q8WXG1 361 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 KCTD13Q8WZ19 329 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 SYN2Q92777 582 aaPredicted RBP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 SMARCD2Q92925 531 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 CDK5RAP1Q96SZ6 601 aaKnown RBP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 UHRF1Q96T88 793 aaPredicted RBP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 PCDHB18PQ96TA0 734 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 PCDH12Q9NPG4 1184 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 OSER1Q9NX31 292 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 CACNA2D2Q9NY47 1150 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 TAS2R14Q9NYV8 317 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 GDE1Q9NZC3 331 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 AIPL1Q9NZN9 384 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 ADAM22Q9P0K1 906 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 COX16Q9P0S2 106 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 ARHGAP20Q9P2F6 1191 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 EPS15L1Q9UBC2 864 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 CHORDC1Q9UHD1 332 aaPredicted RBP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 CCL26Q9Y258 94 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 PRKAB1Q9Y478 270 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 CPQQ9Y646 472 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 BZW2Q9Y6E2 419 aaKnown RBP6.68□□□□□ -1.34
VPS4B-205ENST00000591383 NUMBLQ9Y6R0 609 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 TRIOO75962 3097 aa6.68□□□□□ -1.34
VPS4B-205ENST00000591383 SLC12A8A0AV02 714 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 FAM92AA1XBS5 289 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 PPP1R12AO14974 1030 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 HSF2BPO75031 334 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 TBX18O95935 607 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 CYP1A1P04798 512 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 PTMAP06454 111 aaKnown RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 LAMP2P13473 410 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 NCAM1P13591 858 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 HDCP19113 662 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 EPHA1P21709 976 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MMP8P22894 467 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 FCARP24071 287 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 ADH7P40394 386 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SULT1E1P49888 294 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MRE11P49959 708 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 TUBP50607 506 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 GYS2P54840 703 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 RNASE9P60153 205 aaKnown RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 GFPT1Q06210 699 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 BSPRYQ5W0U4 402 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 HGSNATQ68CP4 663 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 WDR59Q6PJI9 974 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 PARM1Q6UWI2 310 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MON1BQ7L1V2 547 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 TAC4Q86UU9 113 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 ARID3BQ8IVW6 561 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 YAF2Q8IY57 180 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 CMTM8Q8IZV2 173 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 WDTC1Q8N5D0 677 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 DQX1Q8TE96 717 aaKnown RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SH3RF2Q8TEC5 729 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 IRGQQ8WZA9 623 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 FGF14Q92915 247 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 USP13Q92995 863 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 C18orf8Q96DM3 657 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 RSPRY1Q96DX4 576 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 CCDC42Q96M95 316 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MCEEQ96PE7 176 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MDFIQ99750 246 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SYT11Q9BT88 431 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SELENOOQ9BVL4 669 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SLC46A2Q9BY10 475 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 UBXN6Q9BZV1 441 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 KIF9Q9HAQ2 790 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 ZFP14Q9HCL3 533 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 OLA1Q9NTK5 396 aaKnown RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SPTLC3Q9NUV7 552 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 IL37Q9NZH6 218 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 FRRS1LQ9P0K9 344 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MARCH2Q9P0N8 246 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 CFAP97Q9P2B7 532 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 SH3BP1Q9Y3L3 701 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 ZFP37Q9Y6Q3 630 aaPredicted RBP6.67□□□□□ -1.34
VPS4B-205ENST00000591383 COL4A2P08572 1712 aa6.67□□□□□ -1.34
VPS4B-205ENST00000591383 A0A087X0T9 212 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 CDC14CA4D256 554 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 ADARB2-AS1A8MUL3 147 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 HEPACAM2A8MVW5 462 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 B2RBV5 119 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 LOC730098B7Z3J9 87 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 LEFTY2O00292 366 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 GFRA2O00451 464 aa6.66□□□□□ -1.34
VPS4B-205ENST00000591383 IPO7O95373 1038 aaKnown RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 MOCS2O96007 188 aaPredicted RBP6.66□□□□□ -1.34
VPS4B-205ENST00000591383 FTLP02792 175 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms