RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CSKP41240 450 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 ACADSBP45954 432 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 NNTQ13423 1086 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 TEAD4Q15561 434 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 KIF19Q2TAC6 998 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 FSCBQ5H9T9 825 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 MS4A13Q5J8X5 152 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 SYPL2Q5VXT5 272 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 DENND1BQ6P3S1 775 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 DBX2Q6ZNG2 339 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 SLCO6A1Q86UG4 719 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 CCDC117Q8IWD4 279 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-215ENST00000590696 CFAP52Q8N1V2 620 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 SRRTQ9BXP5 876 aaKnown RBP22.56■■□□□ 1.2
DDX39A-215ENST00000590696 RSPH9Q9H1X1 276 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-215ENST00000590696 OSGEPQ9NPF4 335 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 NCKAP1Q9Y2A7 1128 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.56■■□□□ 1.2
DDX39A-215ENST00000590696 SNX11Q9Y5W9 270 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 SPEGQ15772 3267 aa22.56■■□□□ 1.2
DDX39A-215ENST00000590696 CAPN9O14815 690 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 SIN3BO75182 1162 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 MARSP56192 900 aaKnown RBP22.55■■□□□ 1.2
DDX39A-215ENST00000590696 CDH18Q13634 790 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 DCAF6Q58WW2 860 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 MMS22LQ6ZRQ5 1243 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 TAC4Q86UU9 113 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 RHBDD1Q8TEB9 315 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 GANCQ8TET4 914 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 MRGPRX3Q96LB0 322 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 UBE2TQ9NPD8 197 aaPredicted RBP22.55■■□□□ 1.2
DDX39A-215ENST00000590696 XPO7Q9UIA9 1087 aaKnown RBP22.55■■□□□ 1.2
DDX39A-215ENST00000590696 ANKRD6Q9Y2G4 727 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 PCDHGB2Q9Y5G2 931 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 GTF3C3Q9Y5Q9 886 aa22.55■■□□□ 1.2
DDX39A-215ENST00000590696 FLRT2O43155 660 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 LETM1O95202 739 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-215ENST00000590696 CD27P26842 260 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 GRIA4P48058 902 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 PAK1Q13153 545 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 HNRNPA1L2Q32P51 320 aaKnown RBP22.54■■□□□ 1.2
DDX39A-215ENST00000590696 PITRM1Q5JRX3 1037 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 BEND5Q7L4P6 421 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 DHX40Q8IX18 779 aaKnown RBP22.54■■□□□ 1.2
DDX39A-215ENST00000590696 BAHD1Q8TBE0 780 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-215ENST00000590696 STK32AQ8WU08 396 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 SLC4A5Q9BY07 1137 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 PABPC3Q9H361 631 aaKnown RBP22.54■■□□□ 1.2
DDX39A-215ENST00000590696 SCML1Q9UN30 329 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 ERVW-1Q9UQF0 538 aa22.54■■□□□ 1.2
DDX39A-215ENST00000590696 PAPSS1O43252 624 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 MED7O43513 233 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 RNASEH1O60930 286 aaKnown RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 LUC7L3O95232 432 aaKnown RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 CTSOP43234 321 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 SUZ12Q15022 739 aaKnown RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 ZC3H12AQ5D1E8 599 aaKnown RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 LAYNQ6UX15 382 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 USP30Q70CQ3 517 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 LGI2Q8N0V4 545 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 KDM1BQ8NB78 822 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 ZNF606Q8WXB4 792 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 TRIM62Q9BVG3 475 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 POPDC2Q9HBU9 364 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 FBXL12Q9NXK8 326 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 KIAA1522Q9P206 1035 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-215ENST00000590696 CYTH4Q9UIA0 394 aa22.53■■□□□ 1.2
DDX39A-215ENST00000590696 FAM47DPA6NHR8 397 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 TTC34A8MYJ7 566 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 E5RJQ4 531 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 TAF4O00268 1085 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 KCNK3O14649 394 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 MOCS3O95396 460 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 APOEP02649 317 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 CAPNS1P04632 268 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 IGHV4-34P06331 123 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 SCAPQ12770 1279 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 MEA1Q16626 185 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 RAP1GAP2Q684P5 730 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 KIAA0895LQ68EN5 471 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 TMEM110Q86TL2 294 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 CDC6Q99741 560 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 ORAI3Q9BRQ5 295 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 ACP6Q9NPH0 428 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 SERGEFQ9UGK8 458 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 BTBD3Q9Y2F9 522 aa22.52■■□□□ 1.2
DDX39A-215ENST00000590696 MID1O15344 667 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 THAP12O43422 761 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 GADD45BO75293 160 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 TRUB2O95900 331 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 SRPRAP08240 638 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 TACR2P21452 398 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 GNA15P30679 374 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 GALCP54803 685 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 YWHAZP63104 245 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 SFSWAPQ12872 951 aaKnown RBP22.51■■□□□ 1.19
DDX39A-215ENST00000590696 ARID5BQ14865 1188 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 CST6Q15828 149 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 KCNT1Q5JUK3 1230 aa22.51■■□□□ 1.19
DDX39A-215ENST00000590696 C9orf64Q5T6V5 341 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms