RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 RPL7AP62424 266 aaKnown RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 CDO1Q16878 200 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 C15orf59Q2T9L4 293 aaPredicted RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 ARL13BQ3SXY8 428 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 SDE2Q6IQ49 451 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 FBXL22Q6P050 247 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 LONP2Q86WA8 852 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 FAM131BQ86XD5 332 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 CNGA4Q8IV77 575 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 CHPFQ8IZ52 775 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 TSTD1Q8NFU3 115 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 WFDC5Q8TCV5 224 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 RPRD1AQ96P16 312 aaPredicted RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 HHIPQ96QV1 700 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 CIPCQ9C0C6 399 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 SIK2Q9H0K1 926 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 MRPL47Q9HD33 250 aaKnown RBP12.29□□□□□ -0.44
LIG3-213ENST00000590630 ANLNQ9NQW6 1124 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 ARHGAP20Q9P2F6 1191 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 EBF1Q9UH73 591 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 HCN2Q9UL51 889 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 SCINQ9Y6U3 715 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 R4GN57 208 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
LIG3-213ENST00000590630 A0A087X0T9 212 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 H0Y626 953 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 AP5Z1O43299 807 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 ALDH1A2O94788 518 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 ATP5BP06576 529 aaKnown RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 FAM228BP0C875 321 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 CD70P32970 193 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 CNR2P34972 360 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 FNTBP49356 437 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 OXCT1P55809 520 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 HDAC4P56524 1084 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 TBX2Q13207 712 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 ENPP2Q13822 863 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 TMEM215Q68D42 235 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 CHST9Q7L1S5 443 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 ADIPOR2Q86V24 386 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 FNIP1Q8TF40 1166 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 ZNF653Q96CK0 615 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 MRFAP1L1Q96HT8 127 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 LMLNQ96KR4 655 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 GABRG3Q99928 467 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 ZDHHC4Q9NPG8 344 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 POLR3BQ9NW08 1133 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 THAP10Q9P2Z0 257 aaPredicted RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 CNOT8Q9UFF9 292 aaKnown RBP12.28□□□□□ -0.44
LIG3-213ENST00000590630 FAM186AA6NE01 2351 aa12.28□□□□□ -0.44
LIG3-213ENST00000590630 CFAP54Q96N23 3096 aa12.27□□□□□ -0.44
LIG3-213ENST00000590630 OTOGLQ3ZCN5 2332 aa12.27□□□□□ -0.44
LIG3-213ENST00000590630 IGLV3-10A0A075B6K4 115 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 SSU72P8A0A1W2PR75 194 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 TMEM191CA6NGB0 347 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 CCP110O43303 1012 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 CLDN11O75508 207 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 MOCS3O95396 460 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 HOXB2P14652 356 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 POLR2EP19388 210 aaKnown RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 ADRA1BP35368 520 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 GGCXP38435 758 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 EIF4A3P38919 411 aaKnown RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 AIF1P55008 147 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 NRG1Q02297 640 aaPredicted RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 DMWDQ09019 674 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 SCAPQ12770 1279 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 LMAN2Q12907 356 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 SLC18A3Q16572 532 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 FUT11Q495W5 492 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 MBLAC2Q68D91 279 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 HEATR6Q6AI08 1181 aaKnown RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 ALKBH5Q6P6C2 394 aaKnown RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 TMC6Q7Z403 805 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 RASSF3Q86WH2 238 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 CIR1Q86X95 450 aaPredicted RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 ZNF683Q8IZ20 524 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 NKD2Q969F2 451 aaPredicted RBP12.27□□□□□ -0.45
LIG3-213ENST00000590630 IGSF8Q969P0 613 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 NTAN1Q96AB6 310 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 PPP1R9BQ96SB3 815 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 ACOX2Q99424 681 aa12.27□□□□□ -0.45
LIG3-213ENST00000590630 PHOX2BQ99453 314 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms