RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ANKRD6Q9Y2G4 727 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 SNUPNO95149 360 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 PACS1Q6VY07 963 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 SLC4A11Q8NBS3 891 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 TUBGCP3Q96CW5 907 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 PHF21BQ96EK2 531 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 CLPTM1LQ96KA5 538 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 PNPOQ9NVS9 261 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 CD274Q9NZQ7 290 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 STX18Q9P2W9 335 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 HBS1LQ9Y450 684 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 TGDSO95455 350 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 COX4I1P13073 169 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.395e-7■□□□□ 11.3
SMARCA4-215ENST00000590574 RPL14P50914 215 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 OCA2Q04671 838 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 OASLQ15646 514 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 TTC33Q6PID6 262 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 C1orf127Q8N9H9 656 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 ECSITQ9BQ95 431 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 ABI2Q9NYB9 513 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 LIN7AO14910 233 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 LAMB3Q13751 1172 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 DHDDSQ86SQ9 333 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 HASPINQ8TF76 798 aa17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 ADARB2Q9NS39 739 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-215ENST00000590574 CD151P48509 253 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ARHGDIAP52565 204 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 MRPS22P82650 360 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 FUT11Q495W5 492 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 RFWD3Q6PCD5 774 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 PTAR1Q7Z6K3 402 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF786Q8N393 782 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 PPP1R13LQ8WUF5 828 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 GPR20Q99678 358 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 RBM22Q9NW64 420 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TTC36A6NLP5 189 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TMEM63AO94886 807 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 USP17L7P0C7H9 530 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ADORA2AP29274 412 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CRHR1P34998 444 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ASPAP45381 313 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 FOXD4Q12950 439 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 KHDC1Q4VXA5 237 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 SCARA3Q6AZY7 606 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 RBM15BQ8NDT2 890 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 MARK4Q96L34 752 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 COPS7BQ9H9Q2 264 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF541Q9H0D2 1346 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CASTOR2A6NHX0 329 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 NOS2P35228 1153 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 C6orf10Q5SRN2 563 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 GSTCDQ8NEC7 633 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CRYGNQ8WXF5 182 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 WNT8BQ93098 351 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 PRDM12Q9H4Q4 367 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TRPC7Q9HCX4 862 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 NR5A2O00482 541 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 THP07101 528 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 RBP1P09455 135 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 PSMA4P25789 261 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 HMOX2P30519 316 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ANKRD52Q8NB46 1076 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TBL1YQ9BQ87 522 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 FAM192AQ9GZU8 254 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 TCRBV7S3A2A0A539 114 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 EDIL3O43854 480 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 HNRNPCP07910 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 GJC2Q5T442 439 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ZNF470Q6ECI4 717 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 EFHBQ8N7U6 833 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ZSCAN18Q8TBC5 510 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 MTFR1LQ9H019 292 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 BRD8Q9H0E9 1235 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 ATXN3LQ9H3M9 355 aa17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 AFF4Q9UHB7 1163 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-215ENST00000590574 CXCL11O14625 94 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 FAM58BPP0C7Q3 252 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 KRT72Q14CN4 511 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 TMTC4Q5T4D3 741 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 C7orf26Q96N11 449 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 ME2P23368 584 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 GBE1Q04446 702 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 C1orf220Q5T0J3 134 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 ANGPTL8Q6UXH0 198 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 SLC35B2Q8TB61 432 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 TKTL2Q9H0I9 626 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 VTA1Q9NP79 307 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 NT5MQ9NPB1 228 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 SNX15Q9NRS6 342 aa17.48■□□□□ 0.39
SMARCA4-215ENST00000590574 USP1O94782 785 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms