RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-218ENST00000589294 BBS2Q9BXC9 721 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-218ENST00000589294 PCDH18Q9HCL0 1135 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 GPATCH2LQ9NWQ4 482 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
DNMT1-218ENST00000589294 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
DNMT1-218ENST00000589294 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 DUSP12Q9UNI6 340 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 SNX10Q9Y5X0 201 aa12.55□□□□□ -0.4
DNMT1-218ENST00000589294 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 A0A1B0GVM2 712 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 TCAF2A6NFQ2 919 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 WASH4PA8MWX3 477 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 EEF2KO00418 725 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 DAPK3O43293 454 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CREB3O43889 395 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CACNG3O60359 315 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 TBL1XO60907 577 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 TNNT1P13805 278 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 TYRP14679 529 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 IL4RP24394 825 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 EPHB2P29323 1055 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 GJA4P35212 333 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CETN2P41208 172 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 EIF2DP41214 584 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CDH4P55283 916 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 OXCT1P55809 520 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 COPS2P61201 443 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RPS24P62847 133 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 ZNF177Q13360 481 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 SLC44A4Q53GD3 710 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RWDD4Q6NW29 188 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 C1orf228Q6PIY5 440 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RFX8Q6ZV50 586 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RALGPS2Q86X27 583 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CFAP52Q8N1V2 620 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 FIBINQ8TAL6 211 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RAPGEF5Q92565 580 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 KRT35Q92764 455 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 EXOC4Q96A65 974 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 MSANTD3Q96H12 275 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 PRICKLE1Q96MT3 831 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-218ENST00000589294 ZNF670Q9BS34 389 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 CATSPERBQ9H7T0 1116 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 WNT16Q9UBV4 365 aa12.54□□□□□ -0.4
DNMT1-218ENST00000589294 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 C3orf70A6NLC5 250 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 NEDD8-MDP1E9PL57 170 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 GOT1P17174 413 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 HOXD9P28356 352 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 GJC1P36383 396 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 GGCXP38435 758 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 SGSHP51688 502 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 TPI1P60174 286 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 GNG11P61952 73 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 SLC12A1Q13621 1099 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 DPYSQ14117 519 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 TAZQ16635 292 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 SETD3Q86TU7 594 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 CSPG4P5Q96PW8 444 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
DNMT1-218ENST00000589294 CD320Q9NPF0 282 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 TMEM248Q9NWD8 314 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 EFR3BQ9Y2G0 817 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 TBC1D30Q9Y2I9 924 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 NCOR1O75376 2440 aa12.53□□□□□ -0.4
DNMT1-218ENST00000589294 A0A0A0MRY4 1105 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 H0Y626 953 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 MAN2B1O00754 1011 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 CNTN5O94779 1100 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
DNMT1-218ENST00000589294 KRT1P04264 644 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 TUBB4AP04350 444 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 CD48P09326 243 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 CISD3P0C7P0 127 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 OR1E1P30953 314 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 CDKN2BP42772 138 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 MAPKAPK2P49137 400 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 GAB4Q2WGN9 574 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ALFQ53S48 1182 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ANKRD20A8PQ5CZ79 823 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
DNMT1-218ENST00000589294 ZNF783Q6ZMS7 281 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms