RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 MAGEA3P43357 314 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 ZNF135P52742 658 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 CRYBB1P53674 252 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 TMPRSS15P98073 1019 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 CDK18Q07002 472 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 PRKD1Q15139 912 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 TEAD4Q15561 434 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 CA9Q16790 459 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 DCAF6Q58WW2 860 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 GLRA4Q5JXX5 417 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 WASHC2DQ5SRD0 308 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SYCP2LQ5T4T6 812 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 STXBP5Q5T5C0 1151 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 ZNF449Q6P9G9 518 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 KYAT3Q6YP21 454 aaKnown RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 CRLF3Q8IUI8 442 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 B3GALNT2Q8NCR0 500 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 PPP1R14CQ8TAE6 165 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SLC2A14Q8TDB8 520 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SH3TC2Q8TF17 1288 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 E2F7Q96AV8 911 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 STAMBPL1Q96FJ0 436 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 NSL1Q96IY1 281 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SERAC1Q96JX3 654 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SPACA7Q96KW9 195 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SLC9A7Q96T83 725 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 HNRNPABQ99729 332 aaKnown RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SIKE1Q9BRV8 207 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 DUSP16Q9BY84 665 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 BRD8Q9H0E9 1235 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 AP5M1Q9H0R1 490 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 NXF3Q9H4D5 531 aaKnown RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 FAM96AQ9H5X1 160 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 ZNF408Q9H9D4 720 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 EBF2Q9HAK2 575 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 EIF2B3Q9NR50 452 aaKnown RBP7.62□□□□□ -1.19
ZNF540-206ENST00000589117 KCNK4Q9NYG8 393 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 HEY2Q9UBP5 337 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 TTLL3Q9Y4R7 772 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 ZSWIM8A7E2V4 1837 aa7.62□□□□□ -1.19
ZNF540-206ENST00000589117 SF3B1O75533 1304 aaKnown RBP eCLIP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 FAM159BA6NKW6 160 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 M0QZ92 97 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 AP3B1O00203 1094 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SIAH2O43255 324 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 PIAS1O75925 651 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 CCDC130P13994 396 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 WARSP23381 471 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 AKAP5P24588 427 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SULT1E1P49888 294 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 NRLP54845 237 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 LILRA4P59901 499 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MRPS5P82675 430 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GBE1Q04446 702 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KRT72Q14CN4 511 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 TBCCQ15814 346 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ARL13BQ3SXY8 428 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 XKR4Q5GH76 650 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ANKRD20A2Q5SQ80 823 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 FAXCQ5TGI0 409 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ANKRD20A1Q5TYW2 823 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 UNC5AQ6ZN44 842 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 TIFABQ6ZNK6 161 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 NDUFAF2Q8N183 169 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 CCNYQ8ND76 341 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 CFAP61Q8NHU2 1237 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 AGAP11Q8TF27 550 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KCTD13Q8WZ19 329 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MCUR1Q96AQ8 359 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SIGLEC10Q96LC7 697 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 C7orf26Q96N11 449 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 TBC1D10AQ9BXI6 508 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SLC13A1Q9BZW2 595 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 WWP1Q9H0M0 922 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 RRN3Q9NYV6 651 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DTLQ9NZJ0 730 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DCDC2Q9UHG0 476 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 FZD10Q9ULW2 581 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 HES2Q9Y543 173 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MCM3APO60318 1980 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 CITO14578 2027 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GLTPD2A6NH11 291 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 PPEF2O14830 753 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GYG2O15488 501 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DAB1O75553 588 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DGKIO75912 1065 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 METTL18O95568 372 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 F9P00740 461 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 POLBP06746 335 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ESRRAP11474 423 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GOT1P17174 413 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GARSP41250 739 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 LHX1P48742 406 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 GLUD2P49448 558 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DEUP1Q05D60 604 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 AP1B1Q10567 949 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms