RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PYM1Q9BRP8 204 aaKnown RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 THAP7Q9BT49 309 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 CINPQ9BW66 212 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 CIPCQ9C0C6 399 aa3.92□□□□□ -1.78
SMAD4-207ENST00000589076 TWSG1Q9GZX9 223 aa3.92□□□□□ -1.78
SMAD4-207ENST00000589076 CCDC134Q9H6E4 229 aa3.92□□□□□ -1.78
SMAD4-207ENST00000589076 KCNK9Q9NPC2 374 aa3.92□□□□□ -1.78
SMAD4-207ENST00000589076 LIN7CQ9NUP9 197 aaKnown RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 C9orf78Q9NZ63 289 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 UBE2J1Q9Y385 318 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 PCDHB7Q9Y5E2 793 aa3.92□□□□□ -1.78
SMAD4-207ENST00000589076 LRRFIP2Q9Y608 721 aaKnown RBP3.92□□□□□ -1.78
SMAD4-207ENST00000589076 LOC105369274A0A096LPK9 316 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 LOC102723532A0A0G2JNH3 316 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 KIF28PB7ZC32 967 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 B9A039 149 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 BTBD19C9JJ37 291 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 E7EVH7 732 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 EIF3FO00303 357 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 TK1P04183 234 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 TMIGD3P0DMS9 266 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 IGHMBP2P38935 993 aaKnown RBP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 MCM2P49736 904 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 DIO1P49895 249 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 ACTR2P61160 394 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 CCDC15Q0P6D6 951 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 SF3A3Q12874 501 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 CBFBQ13951 182 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 ERV3-1Q14264 604 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 FAM187BQ17R55 369 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 MEX3CQ5U5Q3 659 aaKnown RBP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 CCDC70Q6NSX1 233 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 MMS22LQ6ZRQ5 1243 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 RRAGAQ7L523 313 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 HERC6Q8IVU3 1022 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 OR4N4Q8N0Y3 316 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 PAF1Q8N7H5 531 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 AFG1LQ8WV93 481 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 USP13Q92995 863 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-207ENST00000589076 EFHD1Q9BUP0 239 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 HIPK2Q9H2X6 1198 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 TMLHEQ9NVH6 421 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 SAGE1Q9NXZ1 904 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 ANAPC4Q9UJX5 808 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 FEM1BQ9UK73 627 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 BAG5Q9UL15 447 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 ASAP1Q9ULH1 1129 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 ZBTB1Q9Y2K1 713 aa3.91□□□□□ -1.78
SMAD4-207ENST00000589076 LY6G6EA0A0G2JKS1 128 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 NCAM2O15394 837 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 NKX2-8O15522 239 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 CA12O43570 354 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PDE8BO95263 885 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 TFRCP02786 760 aaKnown RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 MATN1P21941 496 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 DUSP1P28562 367 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 SERPINA4P29622 427 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 ME1P48163 572 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PRKAA2P54646 552 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 RBM6P78332 1123 aaKnown RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PSG6Q00889 435 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 CFHR3Q02985 330 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 LMAN2Q12907 356 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 SMAD1Q15797 465 aaKnown RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 FAM110CQ1W6H9 321 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 AAK1Q2M2I8 961 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 DLK2Q6UY11 383 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 ANKS1BQ7Z6G8 1248 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 C2CD5Q86YS7 1000 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 CSGALNACT1Q8TDX6 532 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PNISRQ8TF01 805 aaKnown RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 GLMPQ8WWB7 406 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 GOLGA1Q92805 767 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 MCRS1Q96EZ8 462 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PRR11Q96HE9 360 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 SAP30LQ9HAJ7 183 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 USP29Q9HBJ7 922 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 NOD2Q9HC29 1040 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 RIC8AQ9NPQ8 531 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 G6PC2Q9NQR9 355 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 VPS45Q9NRW7 570 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 GAR1Q9NY12 217 aaKnown RBP3.9□□□□□ -1.79
SMAD4-207ENST00000589076 RRN3Q9NYV6 651 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 PDP2Q9P2J9 529 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 ZNF69Q9UC07 566 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 LMTK3Q96Q04 1460 aa3.9□□□□□ -1.79
SMAD4-207ENST00000589076 EME2A4GXA9 379 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-207ENST00000589076 SLC38A8A6NNN8 435 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 TTC34A8MYJ7 566 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 PRSS44E7EML9 344 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 M0QZQ0 153 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ADAM10O14672 748 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 SH3BP5O60239 455 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 TULP3O75386 442 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 PYGLP06737 847 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 CYP3A4P08684 503 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 CKMT1AP12532 417 aa3.89□□□□□ -1.79
SMAD4-207ENST00000589076 ALADP13716 330 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms