RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-208ENST00000588692 PILRBQ9UKJ0 227 aa14.95□□□□□ -0.02
DDX39A-208ENST00000588692 SYNJ2BP-COX16A0A087WUM0 186 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 DCDC2BA2VCK2 349 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 H0Y626 953 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 IGLV3-19P01714 112 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 ACADMP11310 421 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 ZNF18P17022 549 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 OXTRP30559 389 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 JAM2P57087 298 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 POLR2FP61218 127 aaKnown RBP14.94□□□□□ -0.02
DDX39A-208ENST00000588692 ST8SIA6P61647 398 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 SLC12A1Q13621 1099 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 TRIM61Q5EBN2 209 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 TAF3Q5VWG9 929 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 CFAP52Q8N1V2 620 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 CEP76Q8TAP6 659 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 FOXJ1Q92949 421 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 SPAG5Q96R06 1193 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 NUSAP1Q9BXS6 441 aaKnown RBP14.94□□□□□ -0.02
DDX39A-208ENST00000588692 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.94□□□□□ -0.02
DDX39A-208ENST00000588692 COX16Q9P0S2 106 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 KIAA1522Q9P206 1035 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-208ENST00000588692 SUN2Q9UH99 717 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 NOCTQ9UK39 431 aaKnown RBP14.94□□□□□ -0.02
DDX39A-208ENST00000588692 SIK3Q9Y2K2 1263 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 PAXBP1Q9Y5B6 917 aa14.94□□□□□ -0.02
DDX39A-208ENST00000588692 PI4KAP42356 2102 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 A0A1B0GVM2 712 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 MED19A0JLT2 244 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 LRRC10BA6NIK2 292 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 PATE3B3GLJ2 98 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 M0QYT0 321 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 GFPT2O94808 682 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 HLA-EP13747 358 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 CDK11BP21127 795 aaKnown RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 ITPKAP23677 461 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 SOX5P35711 763 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 CSKP41240 450 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 KLK7P49862 253 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 TPMTP51580 245 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 OXCT1P55809 520 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 NOMO3P69849 1222 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 CDR2Q01850 454 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 ZBTB16Q05516 673 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 TYRO3Q06418 890 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 NME3Q13232 169 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 PITRM1Q5JRX3 1037 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 FAM102AQ5T9C2 384 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 SLC23A3Q6PIS1 610 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 XYLT1Q86Y38 959 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 NT5C3BQ969T7 300 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 PGAP3Q96FM1 320 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 ZNF419Q96HQ0 510 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 HSPA12BQ96MM6 686 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 NPY6RQ99463 290 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 CD93Q9NPY3 652 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 TMEM74BQ9NUR3 256 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 WSB2Q9NYS7 404 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 TMEM63CQ9P1W3 806 aa14.93□□□□□ -0.02
DDX39A-208ENST00000588692 INTS6Q9UL03 887 aaKnown RBP14.93□□□□□ -0.02
DDX39A-208ENST00000588692 NYNRINQ9P2P1 1898 aaKnown RBP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 EPHB6O15197 1021 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 F9P00740 461 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SRPRAP08240 638 aaKnown RBP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 MMEP08473 750 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 STAT1P42224 750 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 ARID5BQ14865 1188 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 NCAPHQ15003 741 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SYCP1Q15431 976 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 DUOXA1Q1HG43 343 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 PLEKHG6Q3KR16 790 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 FSCBQ5H9T9 825 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 BRMS1LQ5PSV4 323 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SYCP2LQ5T4T6 812 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 ACBD5Q5T8D3 534 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 TRIM72Q6ZMU5 477 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SND1Q7KZF4 910 aaKnown RBP eCLIP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 ARCQ7LC44 396 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SLC41A1Q8IVJ1 513 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 CADM4Q8NFZ8 388 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 TOE1Q96GM8 510 aaKnown RBP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 PCMTD1Q96MG8 357 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-208ENST00000588692 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 PPP1R9BQ96SB3 815 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 NLRC4Q9NPP4 1024 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 TMEM9BQ9NQ34 198 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 PRSS16Q9NQE7 514 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 SUSD2Q9UGT4 822 aa14.92□□□□□ -0.02
DDX39A-208ENST00000588692 ATXN2Q99700 1313 aaKnown RBP14.91□□□□□ -0.02
DDX39A-208ENST00000588692 TM4SF5O14894 197 aa14.91□□□□□ -0.02
DDX39A-208ENST00000588692 CXCR3P49682 368 aa14.91□□□□□ -0.02
DDX39A-208ENST00000588692 SULT1E1P49888 294 aa14.91□□□□□ -0.02
DDX39A-208ENST00000588692 RNASE9P60153 205 aaKnown RBP14.91□□□□□ -0.02
DDX39A-208ENST00000588692 IRX4P78413 519 aa14.91□□□□□ -0.02
DDX39A-208ENST00000588692 UBXN1Q04323 297 aa14.91□□□□□ -0.02
DDX39A-208ENST00000588692 HNRNPA1L2Q32P51 320 aaKnown RBP14.91□□□□□ -0.02
DDX39A-208ENST00000588692 SLC25A52Q3SY17 297 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms