RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 IRF2BP1Q8IU81 584 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 SNX19Q92543 992 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 CAMK1GQ96NX5 476 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 TMEM121BQ9BXQ6 578 aaPredicted RBP19.46■□□□□ 0.71
TRIM47-205ENST00000587774 ZDHHC5Q9C0B5 715 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 MTG2Q9H4K7 406 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 C6orf106Q9H6K1 298 aaPredicted RBP19.46■□□□□ 0.71
TRIM47-205ENST00000587774 POPDC2Q9HBU9 364 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 SLCO1B1Q9Y6L6 691 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 NBEAQ8NFP9 2946 aa19.46■□□□□ 0.71
TRIM47-205ENST00000587774 BCAT2O15382 392 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 HYAL3O43820 417 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 LUC7L3O95232 432 aaKnown RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 APOEP02649 317 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 PROS1P07225 676 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 USP8P40818 1118 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 SLC14A1Q13336 389 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 TAF5Q15542 800 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 DCAF6Q58WW2 860 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 ZC3H12AQ5D1E8 599 aaKnown RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 RAP1GAP2Q684P5 730 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 GBP6Q6ZN66 633 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 C1orf216Q8TAB5 229 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 TTC17Q96AE7 1141 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 FAM81BQ96LP2 452 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 PCED1AQ9H1Q7 454 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 AJAP1Q9UKB5 411 aaPredicted RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 LAMA5O15230 3695 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 TDRD6O60522 2096 aaKnown RBP19.45■□□□□ 0.7
TRIM47-205ENST00000587774 MYLKQ15746 1914 aa19.45■□□□□ 0.7
TRIM47-205ENST00000587774 COL5A1P20908 1838 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 PKD1L2Q7Z442 2459 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 SH3BP5O60239 455 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 SEMA4FO95754 770 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 TRUB2O95900 331 aaKnown RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 DNTTP04053 509 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 YWHAZP63104 245 aaKnown RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 BNC1Q01954 994 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 ZBTB16Q05516 673 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 EXOC3L4Q17RC7 722 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 TTC31Q49AM3 519 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 PITRM1Q5JRX3 1037 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 ZNF776Q68DI1 518 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 CHSY1Q86X52 802 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 PASD1Q8IV76 773 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 NAXDQ8IW45 347 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 LGI2Q8N0V4 545 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 SHC3Q92529 594 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 MRGPRX3Q96LB0 322 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 CPXM1Q96SM3 734 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 THAP9Q9H5L6 903 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.44■□□□□ 0.7
TRIM47-205ENST00000587774 FAM208BQ5VWN6 2430 aa19.44■□□□□ 0.7
TRIM47-205ENST00000587774 GTPBP10A4D1E9 387 aaKnown RBP19.43■□□□□ 0.7
TRIM47-205ENST00000587774 SIN3BO75182 1162 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 ASLP04424 464 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 TACR2P21452 398 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 PON1P27169 355 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 CTSOP43234 321 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-205ENST00000587774 ST8SIA6P61647 398 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 WDTC1Q8N5D0 677 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 GATA6Q92908 595 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 BTN2A3PQ96KV6 586 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 BTBD1Q9H0C5 482 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 RSPH9Q9H1X1 276 aaPredicted RBP19.43■□□□□ 0.7
TRIM47-205ENST00000587774 FAM204AQ9H8W3 233 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 IL21RQ9HBE5 538 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 SIX2Q9NPC8 291 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 SUN2Q9UH99 717 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 CELSR3Q9NYQ7 3312 aa19.43■□□□□ 0.7
TRIM47-205ENST00000587774 GOLGA4Q13439 2230 aaKnown RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 H0Y626 953 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 CER1O95813 267 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 MTIF2P46199 727 aaKnown RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 EIF4EBP2Q13542 120 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 HNRNPA1L2Q32P51 320 aaKnown RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 CCDC117Q8IWD4 279 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 DHX40Q8IX18 779 aaKnown RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 BIRC7Q96CA5 298 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 GAREM1Q9H706 876 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 KLK13Q9UKR3 277 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 PCDHGC3Q9UN70 934 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 ERVW-1Q9UQF0 538 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 FNDC3AQ9Y2H6 1198 aaKnown RBP19.42■□□□□ 0.7
TRIM47-205ENST00000587774 NEUROG3Q9Y4Z2 214 aa19.42■□□□□ 0.7
TRIM47-205ENST00000587774 SYNJ2BP-COX16A0A087WUM0 186 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 A0A1B0GVT2 93 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 PNMA6AP0CW24 399 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 MATKP42679 507 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 NUMBP49757 651 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 AFF3P51826 1226 aaKnown RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 HNRNPDQ14103 355 aaKnown RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 FAM183BPQ6ZVS7 135 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 CIR1Q86X95 450 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 APCDD1Q8J025 514 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 DEFB106AQ8N104 65 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 MLKLQ8NB16 471 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 C1orf131Q8NDD1 294 aaKnown RBP19.41■□□□□ 0.7
TRIM47-205ENST00000587774 PPP1R13BQ96KQ4 1090 aa19.41■□□□□ 0.7
TRIM47-205ENST00000587774 SLC2A13Q96QE2 648 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms