RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CCDC15Q0P6D6 951 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 DDX10Q13206 875 aaKnown RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 STIM1Q13586 685 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 DNASE1L3Q13609 305 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 HSP90AB2PQ58FF8 381 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 PIP4P1Q86T03 277 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 ANKRD13BQ86YJ7 626 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 FSTL5Q8N475 847 aaPredicted RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 MBD3L2Q8NHZ7 208 aaPredicted RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 ADGRE3Q9BY15 652 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 UNKQ9C0B0 810 aaKnown RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 NUP62CLQ9H1M0 184 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 FOXP1Q9H334 677 aaPredicted RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 TBC1D23Q9NUY8 699 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 OBP2AQ9NY56 170 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 SEMA5BQ9P283 1151 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 CHPF2Q9P2E5 772 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 COL5A2P05997 1499 aaPredicted RBP4.91□□□□□ -1.62
VMP1-205ENST00000587470 QSER1Q2KHR3 1735 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 IGSF1Q8N6C5 1336 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 NSD2O96028 1365 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 KIF24Q5T7B8 1368 aa4.91□□□□□ -1.62
VMP1-205ENST00000587470 F8W8V4 182 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 FOXN3O00409 490 aaPredicted RBP4.9□□□□□ -1.63
VMP1-205ENST00000587470 CA12O43570 354 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 PRAMEF2O60811 474 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 TMIGD3P0DMS9 266 aaPredicted RBP4.9□□□□□ -1.63
VMP1-205ENST00000587470 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
VMP1-205ENST00000587470 HMGB2P26583 209 aaKnown RBP4.9□□□□□ -1.63
VMP1-205ENST00000587470 HTR7P34969 479 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 TNNT2P45379 298 aaPredicted RBP4.9□□□□□ -1.63
VMP1-205ENST00000587470 AMPHP49418 695 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 JAK3P52333 1124 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 YPEL5P62699 121 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 SLC9C1Q4G0N8 1177 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 TOM1L2Q6ZVM7 507 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 MORC1Q86VD1 984 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.9□□□□□ -1.63
VMP1-205ENST00000587470 TTC8Q8TAM2 541 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 PHKBQ93100 1093 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 NUAK2Q9H093 628 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 EBF3Q9H4W6 596 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 VPS45Q9NRW7 570 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 POT1Q9NUX5 634 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 HEY2Q9UBP5 337 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 INSRP06213 1382 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 PAPPAQ13219 1627 aa4.9□□□□□ -1.63
VMP1-205ENST00000587470 C10orf71Q711Q0 1435 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 TTC3P53804 2025 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 RGPD5Q99666 1765 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 ABCC6O95255 1503 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 WDR47O94967 919 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 CD63P08962 238 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 CYP19A1P11511 503 aaPredicted RBP4.89□□□□□ -1.63
VMP1-205ENST00000587470 ME1P48163 572 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 MTAPQ13126 283 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 KPNB1Q14974 876 aaKnown RBP4.89□□□□□ -1.63
VMP1-205ENST00000587470 ACOX1Q15067 660 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 EARS2Q5JPH6 523 aaKnown RBP4.89□□□□□ -1.63
VMP1-205ENST00000587470 GRHL2Q6ISB3 625 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 P3H2Q8IVL5 708 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 SAMD14Q8IZD0 417 aaPredicted RBP4.89□□□□□ -1.63
VMP1-205ENST00000587470 SUN3Q8TAQ9 357 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 TSR2Q969E8 191 aaKnown RBP4.89□□□□□ -1.63
VMP1-205ENST00000587470 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 SLC25A32Q9H2D1 315 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 ARL8BQ9NVJ2 186 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 PCDHGB6Q9Y5F9 930 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 SNX13Q9Y5W8 968 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 HS3ST3B1Q9Y662 390 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 RTL1A6NKG5 1358 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 PLEKHG2Q9H7P9 1386 aa4.89□□□□□ -1.63
VMP1-205ENST00000587470 MAP2P11137 1827 aaKnown RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 LRRC37A3O60309 1634 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 FAM90A10PA6NDY2 464 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 INPPL1O15357 1258 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 THAP12O43422 761 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 SCP2P22307 547 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 GALNSP34059 522 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 DGKQP52824 942 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 FHL3Q13643 280 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 EIF4A2Q14240 407 aaKnown RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 C14orf80Q86SX3 495 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 ZDHHC17Q8IUH5 632 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 KRT78Q8N1N4 520 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 ARFGAP1Q8N6T3 406 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 BCAS4Q8TDM0 211 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 GCC1Q96CN9 775 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 IQCDQ96DY2 449 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 LTV1Q96GA3 475 aaPredicted RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 PRR11Q96HE9 360 aaPredicted RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 ZBTB26Q9HCK0 441 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 PNPLA8Q9NP80 782 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
VMP1-205ENST00000587470 FLT4P35916 1363 aa4.88□□□□□ -1.63
VMP1-205ENST00000587470 KIF20BQ96Q89 1820 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms