RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FSCBQ5H9T9 825 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 SLC41A1Q8IVJ1 513 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 OR2T3Q8NH03 318 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 EPS8L1Q8TE68 723 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 TTC17Q96AE7 1141 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 SPAG5Q96R06 1193 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 NUSAP1Q9BXS6 441 aaKnown RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 RRN3Q9NYV6 651 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.3■□□□□ 0.521e-7■■■■■ 26.8
TPM4-206ENST00000587201 TMEM63CQ9P1W3 806 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 KIAA1522Q9P206 1035 aaPredicted RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 SUN2Q9UH99 717 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 PILRBQ9UKJ0 227 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 INTS6Q9UL03 887 aaKnown RBP18.3■□□□□ 0.52
TPM4-206ENST00000587201 STAP1Q9ULZ2 295 aa18.3■□□□□ 0.52
TPM4-206ENST00000587201 EPHB6O15197 1021 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 MOCS3O95396 460 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 ASLP04424 464 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 KCNA4P22459 653 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 CSKP41240 450 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 SULT1E1P49888 294 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 TYRO3Q06418 890 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 MTA1Q13330 715 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 CAMK2GQ13555 558 aaPredicted RBP18.29■□□□□ 0.52
TPM4-206ENST00000587201 SYCP1Q15431 976 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 RABGAP1LQ5R372 815 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
TPM4-206ENST00000587201 ZNF677Q86XU0 584 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 XYLT1Q86Y38 959 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 CPA5Q8WXQ8 436 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 TOE1Q96GM8 510 aaKnown RBP18.29■□□□□ 0.52
TPM4-206ENST00000587201 HSPA12BQ96MM6 686 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 PRMT1Q99873 361 aaKnown RBP18.29■□□□□ 0.52
TPM4-206ENST00000587201 WSB2Q9NYS7 404 aaPredicted RBP18.29■□□□□ 0.52
TPM4-206ENST00000587201 SIK3Q9Y2K2 1263 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
TPM4-206ENST00000587201 CACNA1AO00555 2505 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 C4orf47A7E2U8 309 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 LGALS16A8MUM7 142 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 OXTRP30559 389 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 HOXD12P35452 270 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 SOX5P35711 763 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 SCNN1AP37088 669 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 STAT1P42224 750 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 TPMTP51580 245 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 JAM2P57087 298 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 NOMO3P69849 1222 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 UBXN1Q04323 297 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 NCAPHQ15003 741 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 C2CD6Q53TS8 623 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 PPM1JQ5JR12 505 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 PITRM1Q5JRX3 1037 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 TTC39BQ5VTQ0 682 aaPredicted RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 PEAR1Q5VY43 1037 aaPredicted RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 NAA35Q5VZE5 725 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 FBXL22Q6P050 247 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 SND1Q7KZF4 910 aaKnown RBP eCLIP18.28■□□□□ 0.52
TPM4-206ENST00000587201 CIR1Q86X95 450 aaPredicted RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 AOPEPQ8N6M6 819 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 CEP76Q8TAP6 659 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 SLC20A1Q8WUM9 679 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 FOXJ1Q92949 421 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 ZNF419Q96HQ0 510 aaPredicted RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 RPRD1AQ96P16 312 aaPredicted RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 NPY6RQ99463 290 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
TPM4-206ENST00000587201 FBRSQ9HAH7 460 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 TMEM9BQ9NQ34 198 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 PRSS16Q9NQE7 514 aa18.28■□□□□ 0.52
TPM4-206ENST00000587201 CKAP5Q14008 2032 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 A0A1B0GVM2 712 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 TCAF2A6NFQ2 919 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 GOLGA8SH3BPF8 625 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 CFIP05156 583 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 ZNF18P17022 549 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 CDR2Q01850 454 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 DUOXA1Q1HG43 343 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 SYCP2LQ5T4T6 812 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 SLC23A3Q6PIS1 610 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 CCAR2Q8N163 923 aaKnown RBP18.27■□□□□ 0.52
TPM4-206ENST00000587201 GPR174Q9BXC1 333 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 WDCPQ9H6R7 721 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 PIGVQ9NUD9 493 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 NOCTQ9UK39 431 aaKnown RBP18.27■□□□□ 0.52
TPM4-206ENST00000587201 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 HS3ST4Q9Y661 456 aa18.27■□□□□ 0.52
TPM4-206ENST00000587201 TNRC6BQ9UPQ9 1833 aaKnown RBP18.27■□□□□ 0.52
TPM4-206ENST00000587201 MUC22E2RYF6 1773 aaPredicted RBP18.27■□□□□ 0.51
TPM4-206ENST00000587201 LRRC10BA6NIK2 292 aa18.26■□□□□ 0.51
TPM4-206ENST00000587201 TM4SF5O14894 197 aa18.26■□□□□ 0.51
TPM4-206ENST00000587201 PAGE1O75459 146 aa18.26■□□□□ 0.51
TPM4-206ENST00000587201 TFE3P19532 575 aaPredicted RBP18.26■□□□□ 0.51
TPM4-206ENST00000587201 GGCXP38435 758 aa18.26■□□□□ 0.51
TPM4-206ENST00000587201 CTSOP43234 321 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms