RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 KRT5P13647 590 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 CD27P26842 260 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 CSKP41240 450 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 ACADSBP45954 432 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 RPS24P62847 133 aaKnown RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 PAK1Q13153 545 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 MORC3Q14149 939 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 SUZ12Q15022 739 aaKnown RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 TRIM59Q8IWR1 403 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 SCUBE3Q8IX30 993 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 FIBINQ8TAL6 211 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 TTC17Q96AE7 1141 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 FAM149B1Q96BN6 582 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 MYO19Q96H55 970 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 SRRTQ9BXP5 876 aaKnown RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 RSPH9Q9H1X1 276 aaPredicted RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 KIAA1522Q9P206 1035 aaPredicted RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 INTS6Q9UL03 887 aaKnown RBP16.28■□□□□ 0.2
VAT1-205ENST00000587173 NCKAP1Q9Y2A7 1128 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 TLR6Q9Y2C9 796 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 BTBD3Q9Y2F9 522 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 ZZEF1O43149 2961 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 WDFY3Q8IZQ1 3526 aa16.28■□□□□ 0.2
VAT1-205ENST00000587173 GOLGA8CPA6NN73 597 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 CAPN9O14815 690 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 SIN3BO75182 1162 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 ASLP04424 464 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 FYNP06241 537 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 ATXN1LP0C7T5 689 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 CCT8P50990 548 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 STX17P56962 302 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 SFSWAPQ12872 951 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 NNTQ13423 1086 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 CDH18Q13634 790 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 HNRNPA1L2Q32P51 320 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 KIAA0895LQ68EN5 471 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 ADAT2Q7Z6V5 191 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 ADAM32Q8TC27 787 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 IGSF8Q969P0 613 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 PABPC3Q9H361 631 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 CCDC86Q9H6F5 360 aaKnown RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.2
VAT1-205ENST00000587173 TOR4AQ9NXH8 423 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 SCML1Q9UN30 329 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 NAALADL1Q9UQQ1 740 aa16.27■□□□□ 0.2
VAT1-205ENST00000587173 FAM47DPA6NHR8 397 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 KCNK3O14649 394 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 RNASEH1O60930 286 aaKnown RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 HOXB3P14651 431 aaPredicted RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 BMP6P22004 513 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 GPD2P43304 727 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 FSCBQ5H9T9 825 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 PITRM1Q5JRX3 1037 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 KCNT1Q5JUK3 1230 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 MMS22LQ6ZRQ5 1243 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 USP30Q70CQ3 517 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 ENOSF1Q7L5Y1 443 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 TAC4Q86UU9 113 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 DHX40Q8IX18 779 aaKnown RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 CFAP52Q8N1V2 620 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 SLC39A13Q96H72 371 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 MRGPRX3Q96LB0 322 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 FAM81BQ96LP2 452 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 KREMEN1Q96MU8 473 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 ORAI3Q9BRQ5 295 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 FBXL12Q9NXK8 326 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 SERGEFQ9UGK8 458 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
VAT1-205ENST00000587173 CNTN6Q9UQ52 1028 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 FAM208BQ5VWN6 2430 aa16.26■□□□□ 0.19
VAT1-205ENST00000587173 A0A1W2PP55 124 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 H0Y8X5 98 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 MID1O15344 667 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 DKK1O94907 266 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
VAT1-205ENST00000587173 LUC7L3O95232 432 aaKnown RBP16.25■□□□□ 0.19
VAT1-205ENST00000587173 MOCS3O95396 460 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 IGHV4-34P06331 123 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 CTSOP43234 321 aaPredicted RBP16.25■□□□□ 0.19
VAT1-205ENST00000587173 CTSKP43235 329 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 GRK6P43250 576 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 RPL34P49207 117 aaKnown RBP16.25■□□□□ 0.19
VAT1-205ENST00000587173 CST6Q15828 149 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 DCAF6Q58WW2 860 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 DENND1BQ6P3S1 775 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 BEND5Q7L4P6 421 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 TMPRSS7Q7RTY8 843 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 LGI2Q8N0V4 545 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 KDM1BQ8NB78 822 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 MED15Q96RN5 788 aa16.25■□□□□ 0.19
VAT1-205ENST00000587173 ERVW-1Q9UQF0 538 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms