RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 PNOCQ13519 176 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 CAMK2BQ13554 666 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 COL28A1Q2UY09 1125 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 HNRNPA1L2Q32P51 320 aaKnown RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 KCNT1Q5JUK3 1230 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 C19orf48Q6RUI8 117 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 TMEM270Q6UE05 265 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 BEND5Q7L4P6 421 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 PDZD3Q86UT5 571 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 MFN1Q8IWA4 741 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 HJURPQ8NCD3 748 aaPredicted RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 SKA1Q96BD8 255 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC39A13Q96H72 371 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 MRGPRX3Q96LB0 322 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 NT5C1BQ96P26 610 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 ACE2Q9BYF1 805 aaPredicted RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 PABPC3Q9H361 631 aaKnown RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 FBXL12Q9NXK8 326 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 ADAMTS1Q9UHI8 967 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 INTS6Q9UL03 887 aaKnown RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 TPX2Q9ULW0 747 aaKnown RBP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 TLR6Q9Y2C9 796 aa8.33□□□□□ -1.08
CAPNS1-203ENST00000586963 A0A1B0GTQ1 180 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 LRRC72A6NJI9 287 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 RNF225M0QZC1 329 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 KCNK3O14649 394 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 P4HA2O15460 535 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SART1O43290 800 aaKnown RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SIN3BO75182 1162 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SMC2O95347 1197 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 FYNP06241 537 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SRPRAP08240 638 aaKnown RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CDK4P11802 303 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CSKP41240 450 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 RPL34P49207 117 aaKnown RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 RGS7P49802 495 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 C21orf59P57076 290 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CETN1Q12798 172 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CST6Q15828 149 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SOWAHCQ53LP3 525 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 MS4A13Q5J8X5 152 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 C9orf64Q5T6V5 341 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 NADSYN1Q6IA69 706 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 TMPRSS12Q86WS5 348 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CCDC117Q8IWD4 279 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PPM1KQ8N3J5 372 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PDCD7Q8N8D1 485 aaKnown RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 OR2T34Q8NGX1 318 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 GANCQ8TET4 914 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CLEC4CQ8WTT0 213 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 FCRL2Q96LA5 508 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PRICKLE1Q96MT3 831 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 CEP63Q96MT8 703 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 SERPINB11Q96P15 392 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 ZSWIM1Q9BR11 485 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 NEUROG2Q9H2A3 272 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 MTG2Q9H4K7 406 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 STIM2Q9P246 746 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 FZD4Q9ULV1 537 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PCDHB4Q9Y5E5 795 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PCDHGA1Q9Y5H4 931 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 PLXNB3Q9ULL4 1909 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 NUMA1Q14980 2115 aa8.32□□□□□ -1.08
CAPNS1-203ENST00000586963 ITIH6Q6UXX5 1313 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 URB1O60287 2271 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 A0A087WV48 116 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 EDDM13A0A1B0GTR0 161 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 A0A1W2PP55 124 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 FAM47DPA6NHR8 397 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 M0QYV0 167 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 PIK3R2O00459 728 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 MID1O15344 667 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 YKT6O15498 198 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 LUC7L3O95232 432 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 MOCS3O95396 460 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 C1SP09871 688 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 GOT1P17174 413 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC8A1P32418 973 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 PPP1R2P41236 205 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 GPD2P43304 727 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 ACADSBP45954 432 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 CCR5P51681 352 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 RPS24P62847 133 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 ECT2LQ008S8 904 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 GCNT1Q02742 428 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 STIM1Q13586 685 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC12A1Q13621 1099 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 CDH18Q13634 790 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 MEA1Q16626 185 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 DCAF6Q58WW2 860 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms