RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 CHST9Q7L1S5 443 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 ADIPOR2Q86V24 386 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 MCOLN2Q8IZK6 566 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 CARNMT1Q8N4J0 409 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 WFDC5Q8TCV5 224 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 RUBCNQ92622 972 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 LMLNQ96KR4 655 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 RPRD1AQ96P16 312 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 CD248Q9HCU0 757 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 BCCIPQ9P287 314 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 CAPN11Q9UMQ6 739 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 PLA2G4CQ9UP65 541 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 LUC7L2Q9Y383 392 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.74□□□□□ -0.219e-8■□□□□ 11
SMARCA4-210ENST00000586892 BZW2Q9Y6E2 419 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 PLXND1Q9Y4D7 1925 aa13.74□□□□□ -0.21
SMARCA4-210ENST00000586892 MUC22E2RYF6 1773 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 DLDP09622 509 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 GZMAP12544 262 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 POLR2EP19388 210 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 RFC1P35251 1148 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 IL12RB1P42701 662 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 OXCT1P55809 520 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 ATP11AP98196 1134 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 LMAN2Q12907 356 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 FUT11Q495W5 492 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 CCDC14Q49A88 953 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 MBLAC2Q68D91 279 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 SERPINA13PQ6UXR4 307 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 CCAR2Q8N163 923 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 JOSD2Q8TAC2 188 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 HMGB4Q8WW32 186 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 SORCS1Q8WY21 1168 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 C1orf74Q96LT6 269 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 HAPLN3Q96S86 360 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 TPSD1Q9BZJ3 242 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 SIK2Q9H0K1 926 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 NCDNQ9UBB6 729 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
SMARCA4-210ENST00000586892 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 WASH3PC4AMC7 463 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 CLDN11O75508 207 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 MOCS3O95396 460 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 GJB6O95452 261 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 ASLP04424 464 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 GYPCP04921 128 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 SERPING1P05155 500 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 GABRG2P18507 467 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 GPD1P21695 349 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 RRM1P23921 792 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 ATXN1P54253 815 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 BYSLQ13895 437 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 CDO1Q16878 200 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 C5orf22Q49AR2 442 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 TDRD12Q587J7 1177 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 FSCBQ5H9T9 825 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 PPP1R15BQ5SWA1 713 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 WDR59Q6PJI9 974 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 LRRC31Q6UY01 552 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 VPS36Q86VN1 386 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 CIR1Q86X95 450 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 FAM131BQ86XD5 332 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 CPLX3Q8WVH0 158 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 CENPIQ92674 756 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 TTC17Q96AE7 1141 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 ZC3H10Q96K80 434 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 SPACA7Q96KW9 195 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 PPP1R9BQ96SB3 815 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 HINFPQ9BQA5 517 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 ANLNQ9NQW6 1124 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 TAS2R14Q9NYV8 317 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
SMARCA4-210ENST00000586892 TMCO5BA8MYB1 307 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 RTN2O75298 545 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 EPHX1P07099 455 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 RETP07949 1114 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 SKILP12757 684 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 DESP17661 470 aa13.71□□□□□ -0.21
SMARCA4-210ENST00000586892 GGCXP38435 758 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms