RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CENPTQ96BT3 561 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 EBNA1BP2Q99848 306 aaKnown RBP12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 RNF208Q9H0X6 261 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 CHST12Q9NRB3 414 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 GJD2Q9UKL4 321 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 NME7Q9Y5B8 376 aa12.77□□□□□ -0.36
SMARCA4-208ENST00000585799 A0A1W2PQH9 124 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 ZBTB24O43167 697 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 TBX18O95935 607 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 TAC1P20366 129 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 GATMP50440 423 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF235Q14590 738 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 NCBP2-AS2Q69YL0 99 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 GRAMD1AQ96CP6 724 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 SCLYQ96I15 445 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 FCRL2Q96LA5 508 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 FRMD8Q9BZ67 464 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 FZD10Q9ULW2 581 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 EIF4E1BA6NMX2 242 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 NEMP1O14524 444 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 ENO1P06733 434 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 GPR15P49685 360 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 GJA9P57773 515 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 PRAMEP78395 509 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 LPIN1Q14693 890 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 NFE2Q16621 373 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF567Q8N184 647 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 SPATA22Q8NHS9 363 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 CFAP61Q8NHU2 1237 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 IFT43Q96FT9 208 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 PCDHB5Q9Y5E4 795 aa12.77□□□□□ -0.37
SMARCA4-208ENST00000585799 MGEA5O60502 916 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 CBX6O95503 412 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 TBX4P57082 545 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 ZBTB6Q15916 424 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 WDR75Q8IWA0 830 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 FAXDC2Q96IV6 333 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 KLHL5Q96PQ7 755 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 PTCH2Q9Y6C5 1203 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 C9IYK1 514 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 PAGE1O75459 146 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 MYL2P10916 166 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 HNRNPH1P31943 449 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 RAP1GAP2Q684P5 730 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 DCLRE1AQ6PJP8 1040 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 AZIN2Q96A70 460 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 SERAC1Q96JX3 654 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 LRRC40Q9H9A6 602 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 ARMCX1Q9P291 453 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 DNM1LO00429 736 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 GYG2O15488 501 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 VAPBO95292 243 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 TOP3BO95985 862 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 INHAP05111 366 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 PMLP29590 882 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 SPRP35270 261 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 SERPINB9P50453 376 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 DUSP4Q13115 394 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 N4BP2L1Q5TBK1 243 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
SMARCA4-208ENST00000585799 TSPAN3O60637 253 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 STAU1O95793 577 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 BAG2O95816 211 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PSMD5Q16401 504 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PARP6Q2NL67 630 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 ECHDC2Q86YB7 292 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 APOPT1Q96IL0 206 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 RMDN2Q96LZ7 410 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PPP1R10Q96QC0 940 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CD248Q9HCU0 757 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 A0A0U1RQF3 1178 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 UBA6A0AVT1 1052 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 DPYSL4O14531 572 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PRRG1O14668 218 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms