RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CST3P01034 146 aaPredicted RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 IGLV3-19P01714 112 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 GYPCP04921 128 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 IGHV4-34P06331 123 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 PTPN1P18031 435 aaKnown RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 TRIM21P19474 475 aaKnown RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 ACO1P21399 889 aaKnown RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 OXTRP30559 389 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 CASP14P31944 242 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 GRIA4P48058 902 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 SLC5A3P53794 718 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 MFAP3P55082 362 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 CDH8P55286 799 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 RBP5P82980 135 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 TEAD4Q15561 434 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 SNRNP35Q16560 246 aaKnown RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 SLFN12LQ6IEE8 588 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 PAQR9Q6ZVX9 377 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 HTR3DQ70Z44 454 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 CBWD2Q8IUF1 395 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 GPD1LQ8N335 351 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 NEK11Q8NG66 645 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 KCNN1Q92952 543 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 HIC2Q96JB3 615 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 CRACR2AQ9BSW2 395 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 NACA2Q9H009 215 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 WDR70Q9NW82 654 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
NUP85-224ENST00000583948 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 SIK3Q9Y2K2 1263 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 PCDHGA1Q9Y5H4 931 aa11.98□□□□□ -0.49
NUP85-224ENST00000583948 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 ESPNB1AK53 854 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 CASC3O15234 703 aaKnown RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 MAPK13O15264 365 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 SDC3O75056 442 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 SEMA4FO95754 770 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 KLKB1P03952 638 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 HMBSP08397 361 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 ABCB4P21439 1286 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 WARSP23381 471 aaKnown RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 GNL1P36915 607 aaPredicted RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 PPP3CCP48454 512 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 VAMP7P51809 220 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 SRSF6Q13247 344 aaKnown RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 ENPP2Q13822 863 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 GPRIN1Q7Z2K8 1008 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 CNGA4Q8IV77 575 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 KIAA1958Q8N8K9 716 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 TC2NQ8N9U0 490 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 RBBP8NLQ8NC74 664 aaPredicted RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 ZNF248Q8NDW4 579 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 SLC35C1Q96A29 364 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 JAKMIP2Q96AA8 810 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 ELF4Q99607 663 aaPredicted RBP11.97□□□□□ -0.49
NUP85-224ENST00000583948 CIPCQ9C0C6 399 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 NMUR1Q9HB89 426 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 ANKMY1Q9P2S6 941 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 SERGEFQ9UGK8 458 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 FBXO10Q9UK96 956 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 ITGA11Q9UKX5 1188 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 PYCARDQ9ULZ3 195 aa11.97□□□□□ -0.49
NUP85-224ENST00000583948 CAPN8A6NHC0 703 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 KIAA0391O15091 583 aaKnown RBP11.96□□□□□ -0.49
NUP85-224ENST00000583948 TLR5O60602 858 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 MT-CO3P00414 261 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 SKILP12757 684 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 CD27P26842 260 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 KRT9P35527 623 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 FMO5P49326 533 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 C21orf59P57076 290 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 GABREP78334 506 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 CCZ1BP86790 482 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 CCZ1P86791 482 aaPredicted RBP11.96□□□□□ -0.49
NUP85-224ENST00000583948 CYP24A1Q07973 514 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 KCNMA1Q12791 1236 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 FYB2Q5VWT5 728 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 GBP6Q6ZN66 633 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 CCDC112Q8NEF3 446 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 ZMIZ2Q8NF64 920 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 TMEM174Q8WUU8 243 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 CCDC127Q96BQ5 260 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 WBP1Q96G27 269 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 SNX25Q9H3E2 840 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
NUP85-224ENST00000583948 MARK1Q9P0L2 795 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
NUP85-224ENST00000583948 LUC7L2Q9Y383 392 aaKnown RBP11.96□□□□□ -0.49
NUP85-224ENST00000583948 KIF26BQ2KJY2 2108 aa11.96□□□□□ -0.5
NUP85-224ENST00000583948 SPTAN1Q13813 2472 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms