RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 MRPL44Q9H9J2 332 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 OSER1Q9NX31 292 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 EVLQ9UI08 416 aaPredicted RBP8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 ADAM30Q9UKF2 790 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
PPP4R1-225ENST00000583438 HELZ2Q9BYK8 2649 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 HMX2A2RU54 273 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 UPK3BL1B0FP48 263 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 WASH3PC4AMC7 463 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 PRRT4C9JH25 899 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 UPK3BL2E5RIL1 263 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 MSTNO14793 375 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 HUS1O60921 280 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 TULP3O75386 442 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 NFATC1O95644 943 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 PAX3P23760 479 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 PNPLA4P41247 253 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 NOP14P78316 857 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 MYL7Q01449 175 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 IFRD2Q12894 506 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 MAP7Q14244 749 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 SLFN12LQ6IEE8 588 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 SLC23A3Q6PIS1 610 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 DENND5BQ6ZUT9 1274 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 EPM2AIP1Q7L775 607 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 TMEM25Q86YD3 366 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 MCATQ8IVS2 390 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 NOC3LQ8WTT2 800 aaKnown RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 ACCSQ96QU6 501 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 SMYD3Q9H7B4 428 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 C7orf69Q9H7B7 122 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 IL21RQ9HBE5 538 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 CALCOCO1Q9P1Z2 691 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 UXTQ9UBK9 157 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 ZMYM5Q9UJ78 669 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 CDH9Q9ULB4 789 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 RAD54BQ9Y620 910 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
PPP4R1-225ENST00000583438 MDM4O15151 490 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 VNN1O95497 513 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 TBX18O95935 607 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 GRIK1P39086 918 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 CDH8P55286 799 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 SIM1P81133 766 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 MRPS21P82921 87 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 RBP5P82980 135 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 USP39Q53GS9 565 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 LRSAM1Q6UWE0 723 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 TRAPPC11Q7Z392 1133 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 SYT12Q8IV01 421 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 MRPL41Q8IXM3 137 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 GPD1LQ8N335 351 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 MYCBPAPQ8TBZ2 947 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 SPATA18Q8TC71 538 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 USP28Q96RU2 1077 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 PNKPQ96T60 521 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 SMOQ99835 787 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 ARHGEF4Q9NR80 690 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 IL37Q9NZH6 218 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 HSPBP1Q9NZL4 362 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 GMIPQ9P107 970 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 CHORDC1Q9UHD1 332 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 NEUROG3Q9Y4Z2 214 aa8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 SRPRBQ9Y5M8 271 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 ARID1BQ8NFD5 2236 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 COL27A1Q8IZC6 1860 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-225ENST00000583438 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 KCNJ18B7U540 433 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 HHLA1C9JL84 531 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 H3BQV1 296 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 HOXC11O43248 304 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SH3BP5O60239 455 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 CFIP05156 583 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 TMEM191BP0C7N4 346 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 ZDHHC11BP0C7U3 371 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 IRF1P10914 325 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 IDEP14735 1019 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PTPN1P18031 435 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 SCP2P22307 547 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 PCSK1P29120 753 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 LHX1P48742 406 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 MYL6P60660 151 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 CEBPZQ03701 1054 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 CDK5R2Q13319 367 aa8.33□□□□□ -1.08
PPP4R1-225ENST00000583438 RABEP1Q15276 862 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms