RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FAM217AQ8IXS0 508 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ACTRT1Q8TDG2 376 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RSPRY1Q96DX4 576 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CSPG4P5Q96PW8 444 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RNF157Q96PX1 679 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 EPAS1Q99814 870 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PHF7Q9BWX1 381 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CALN1Q9BXU9 219 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MAK16Q9BXY0 300 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PPARGC1AQ9UBK2 798 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RNF14Q9UBS8 474 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CDC23Q9UJX2 597 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZDBF2Q9HCK1 2354 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 IGLV3-10A0A075B6K4 115 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 GFRA2O00451 464 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 KRT10P13645 584 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 AMPD1P23109 780 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FCARP24071 287 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 GGCXP38435 758 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DPYSQ14117 519 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LLGL1Q15334 1064 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TANGO2Q6ICL3 276 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LRRC31Q6UY01 552 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RFX8Q6ZV50 586 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 OTOP3Q7RTS5 596 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SLC13A5Q86YT5 568 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 BBS7Q8IWZ6 715 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PQLC3Q8N755 202 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PCDH19Q8TAB3 1148 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 IGSF8Q969P0 613 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 E2F7Q96AV8 911 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RPGRIP1Q96KN7 1286 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HERPUD2Q9BSE4 406 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HEMGNQ9BXL5 484 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PRDM16Q9HAZ2 1276 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZFP14Q9HCL3 533 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 STIM2Q9P246 746 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 EPS15L1Q9UBC2 864 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 VANGL2Q9ULK5 521 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 USP34Q70CQ2 3546 aa16.87■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DOCK8Q8NF50 2099 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HEPACAM2A8MVW5 462 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 F5H5T6 163 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SCAMP3O14828 347 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HOXC13P31276 330 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TPI1P60174 286 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ADCY2Q08462 1091 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TCF15Q12870 199 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 KAZNQ674X7 775 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CHSY1Q86X52 802 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RFX6Q8HWS3 928 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LGI2Q8N0V4 545 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CPXM2Q8N436 756 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TTC16Q8NEE8 873 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 BPIFB1Q8TDL5 484 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TBC1D31Q96DN5 1066 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MYEOVQ96EZ4 313 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LINC00597Q9H2U6 94 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RRAGDQ9NQL2 400 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 NEU3Q9UQ49 428 aa16.86■□□□□ 0.29
CDK5RAP3-228ENST00000583363 WASH4PA8MWX3 477 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TRDMT1O14717 391 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DAPK3O43293 454 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TJP3O95049 919 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FGGP02679 453 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ERCC2P18074 760 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 EPHB2P29323 1055 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CHKAP35790 457 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PTPN5P54829 565 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TFDP2Q14188 446 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LONRF2Q1L5Z9 754 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SLC9A4Q6AI14 798 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RWDD4Q6NW29 188 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FBXL6Q8N531 539 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ELSPBP1Q96BH3 223 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CAPZA3Q96KX2 299 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CATSPERBQ9H7T0 1116 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ARHGEF4Q9NR80 690 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MRFAP1Q9Y605 127 aa16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HELZP42694 1942 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-228ENST00000583363 NUP210Q8TEM1 1887 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TCRBV7S2A1N4TA0A589 114 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PDE2AO00408 941 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SLC9A3R1O14745 358 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DCLK1O15075 740 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TSPAN3O60637 253 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CST8O60676 142 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PAFAH1B1P43034 410 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SIGLEC14Q08ET2 396 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PARM1Q6UWI2 310 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 BBS12Q6ZW61 710 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MFSD6LQ8IWD5 586 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZDHHC14Q8IZN3 488 aa16.84■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ADGRG2Q8IZP9 1017 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms