RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KIAA0556O60303 1618 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 ANKRD50Q9ULJ7 1429 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 E9PCH4 1651 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 ITSN2Q9NZM3 1697 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 CAMSAP2Q08AD1 1489 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 SHANK2Q9UPX8 1470 aa4.65□□□□□ -1.66
SMCHD1-208ENST00000583344 PRPF4O43172 522 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 THAP12O43422 761 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 TSPAN6O43657 245 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 CCNT2O60583 730 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 DMWDQ09019 674 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 SEMA3BQ13214 749 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 DAG1Q14118 895 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 PIK3CD-AS1Q5SR53 167 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 FAXCQ5TGI0 409 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 TRAPPC11Q7Z392 1133 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 CCDC146Q8IYE0 955 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 CLASRPQ8N2M8 674 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 OR52L2PQ8NGH6 319 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 ASB12Q8WXK4 309 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 RBM38Q9H0Z9 239 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 CDCP1Q9H5V8 836 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 PNPLA8Q9NP80 782 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 IPO11Q9UI26 975 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 ICKQ9UPZ9 632 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 EMSYQ7Z589 1322 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 GPRASP1Q5JY77 1395 aa4.65□□□□□ -1.67
SMCHD1-208ENST00000583344 PRG4Q92954 1404 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 CROCC2H7BZ55 1655 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 M0QZQ0 153 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TNFRSF13BO14836 293 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 COQ9O75208 318 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TSPY4P0CV99 314 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TSPY10P0CW01 314 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 AKR1A1P14550 325 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 RPL17P18621 184 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 SLC8A1P32418 973 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 GAD2Q05329 585 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 C6orf10Q5SRN2 563 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ASPHD1Q5U4P2 390 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 LIPMQ5VYY2 423 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ZNF324BQ6AW86 544 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 Q6ZTC4 211 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 CCDC28AQ8IWP9 274 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 FBXL14Q8N1E6 418 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ZFPM2Q8WW38 1151 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 OIT3Q8WWZ8 545 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 PHKBQ93100 1093 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ELOVL1Q9BW60 279 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TRIM2Q9C040 744 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ARHGAP39Q9C0H5 1083 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 FZD3Q9NPG1 666 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TMOD4Q9NZQ9 345 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 TCEAL9Q9UHQ7 104 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 CEP170Q5SW79 1584 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 SPATA31A5Q5VU36 1347 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 SPATA31A7Q8IWB4 1347 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ZNF335Q9H4Z2 1342 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 LAMC1P11047 1609 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 NUP155O75694 1391 aa4.64□□□□□ -1.67
SMCHD1-208ENST00000583344 ABCC10Q5T3U5 1492 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 PLEKHH2Q8IVE3 1493 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 KIF13AQ9H1H9 1805 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ZSCAN9O15535 394 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 WNT1P04628 370 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ENO1P06733 434 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 MMP8P22894 467 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 GSTM5P46439 218 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ASIC2Q16515 512 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 RAP1GAP2Q684P5 730 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 MRNIPQ6NTE8 343 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 CCDC144NLQ6NUI1 221 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ACSM6Q6P461 480 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ZNF474Q6S9Z5 364 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 PIK3AP1Q6ZUJ8 805 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 DDIASQ8IXT1 998 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 LAS2Q8IYD9 372 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 NEUROG1Q92886 237 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 GPR78Q96P69 363 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 HTATIP2Q9BUP3 242 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 GJB4Q9NTQ9 266 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 INSL5Q9Y5Q6 135 aa4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 BLMP54132 1417 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-208ENST00000583344 ATP10AO60312 1499 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 ARHGEF5Q12774 1597 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 CLCA1A8K7I4 914 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 RHPN2P1A8MT19 583 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 SPTLC2O15270 562 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 PRC1O43663 620 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 SLC5A2P31639 672 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 P3H1Q32P28 736 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 C16orf89Q6UX73 402 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 NGEFQ8N5V2 710 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 ATP11CQ8NB49 1132 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 LPAR1Q92633 364 aa4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 TSR2Q969E8 191 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-208ENST00000583344 TESK2Q96S53 571 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms