RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CST6Q15828 149 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 HNRNPA1L2Q32P51 320 aaKnown RBP16.78■□□□□ 0.28
SREBF1-221ENST00000583080 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 PKDCCQ504Y2 493 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-221ENST00000583080 MPP7Q5T2T1 576 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 TMPRSS12Q86WS5 348 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 UBR7Q8N806 425 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 CLEC4CQ8WTT0 213 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 SNX21Q969T3 373 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
SREBF1-221ENST00000583080 TTC17Q96AE7 1141 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 NXPE2Q96DL1 559 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 CNDP2Q96KP4 475 aaKnown RBP16.78■□□□□ 0.28
SREBF1-221ENST00000583080 CNGB3Q9NQW8 809 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 NCKAP1Q9Y2A7 1128 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 C10orf142B7Z368 130 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 E9PAM4 449 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 ACSL4O60488 711 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 RFPL3O75679 317 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 RNASEH2AO75792 299 aaKnown RBP16.77■□□□□ 0.28
SREBF1-221ENST00000583080 SETSIPP0DME0 302 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 EPB41P11171 864 aaKnown RBP16.77■□□□□ 0.28
SREBF1-221ENST00000583080 CTSOP43234 321 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-221ENST00000583080 ACADVLP49748 655 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 MMAAQ8IVH4 418 aaKnown RBP16.77■□□□□ 0.28
SREBF1-221ENST00000583080 SCML4Q8N228 414 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 HJURPQ8NCD3 748 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-221ENST00000583080 SAP25Q8TEE9 199 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 TFAP2BQ92481 460 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 NEUROG2Q9H2A3 272 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 AASDHPPTQ9NRN7 309 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 PCDHGA1Q9Y5H4 931 aa16.77■□□□□ 0.28
SREBF1-221ENST00000583080 SETXQ7Z333 2677 aaKnown RBP16.77■□□□□ 0.27
SREBF1-221ENST00000583080 PTPRQQ9UMZ3 2332 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 FAM237AA0A1B0GTK4 181 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 A0A1W2PR77 199 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 TTC34A8MYJ7 566 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 DFNA5O60443 496 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 STX10O60499 249 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 C1QL1O75973 258 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 LDOC1O95751 146 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-221ENST00000583080 ITGAVP06756 1048 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 VDRP11473 427 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 ABCB4P21439 1286 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 EPHA8P29322 1005 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-221ENST00000583080 PSMD8P48556 350 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 SLC11A2P49281 568 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 TBX4P57082 545 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 ST8SIA6P61647 398 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 SEMG2Q02383 582 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 LRMPQ12912 555 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 FSCBQ5H9T9 825 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 C9orf64Q5T6V5 341 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 HES3Q5TGS1 186 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 PMF1Q6P1K2 205 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 CARNMT1Q8N4J0 409 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 AADATQ8N5Z0 425 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 EID2Q8N6I1 236 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 FIBINQ8TAL6 211 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 FCRL2Q96LA5 508 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-221ENST00000583080 UBL7Q96S82 380 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-221ENST00000583080 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
SREBF1-221ENST00000583080 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 SCML1Q9UN30 329 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
SREBF1-221ENST00000583080 IRAK2O43187 625 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 CALCAP01258 141 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 HSP90AA1P07900 732 aaKnown RBP16.75■□□□□ 0.27
SREBF1-221ENST00000583080 JUPP14923 745 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 CD38P28907 300 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 HNF1BP35680 557 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 NUMBP49757 651 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 PPP2CBP62714 309 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 PPP2CAP67775 309 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 PITRM1Q5JRX3 1037 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 C6orf118Q5T5N4 469 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 UNC45BQ8IWX7 931 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 OR2T34Q8NGX1 318 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 OMDQ99983 421 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 FZD4Q9ULV1 537 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 ERVW-1Q9UQF0 538 aa16.75■□□□□ 0.27
SREBF1-221ENST00000583080 MYLKQ15746 1914 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 LRRC72A6NJI9 287 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 M0QYV0 167 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 CETN3O15182 167 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 RNASEH1O60930 286 aaKnown RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 LTFP02788 710 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 ASLP04424 464 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 SLC8A1P32418 973 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 EIF2S3P41091 472 aaKnown RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 ADPRHP54922 357 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms