RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 EPHB2P29323 1055 aa15.06■□□□□ 0
MKS1-211ENST00000581761 HPDP32754 393 aaPredicted RBP15.06■□□□□ 0
MKS1-211ENST00000581761 SERPINB6P35237 376 aa15.06■□□□□ 0
MKS1-211ENST00000581761 GLUD2P49448 558 aa15.06■□□□□ 0
MKS1-211ENST00000581761 PSEN1P49768 467 aa15.06■□□□□ 0
MKS1-211ENST00000581761 ATP1A2P50993 1020 aa15.06■□□□□ 0
MKS1-211ENST00000581761 TBX4P57082 545 aa15.06■□□□□ 0
MKS1-211ENST00000581761 MAGOHP61326 146 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 HTRA4P83105 476 aaPredicted RBP15.06■□□□□ 0
MKS1-211ENST00000581761 SKOR1P84550 965 aa15.06■□□□□ 0
MKS1-211ENST00000581761 EFEMP1Q12805 493 aa15.06■□□□□ 0
MKS1-211ENST00000581761 TAF10Q12962 218 aa15.06■□□□□ 0
MKS1-211ENST00000581761 AUHQ13825 339 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 STAT4Q14765 748 aa15.06■□□□□ 0
MKS1-211ENST00000581761 RAB30Q15771 203 aa15.06■□□□□ 0
MKS1-211ENST00000581761 LONRF1Q17RB8 773 aa15.06■□□□□ 0
MKS1-211ENST00000581761 SLC8B1Q6J4K2 584 aa15.06■□□□□ 0
MKS1-211ENST00000581761 RWDD4Q6NW29 188 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 VPS52Q8N1B4 723 aa15.06■□□□□ 0
MKS1-211ENST00000581761 ARFGAP2Q8N6H7 521 aa15.06■□□□□ 0
MKS1-211ENST00000581761 COLGALT1Q8NBJ5 622 aa15.06■□□□□ 0
MKS1-211ENST00000581761 CCNYQ8ND76 341 aa15.06■□□□□ 0
MKS1-211ENST00000581761 TBC1D31Q96DN5 1066 aa15.06■□□□□ 0
MKS1-211ENST00000581761 PGM2Q96G03 612 aa15.06■□□□□ 0
MKS1-211ENST00000581761 SPATA13Q96N96 652 aa15.06■□□□□ 0
MKS1-211ENST00000581761 STMN4Q9H169 189 aaPredicted RBP15.06■□□□□ 0
MKS1-211ENST00000581761 RC3H2Q9HBD1 1191 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 OLA1Q9NTK5 396 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 CLIC5Q9NZA1 410 aa15.06■□□□□ 0
MKS1-211ENST00000581761 MRPL42Q9Y6G3 142 aaKnown RBP15.06■□□□□ 0
MKS1-211ENST00000581761 E7ESA3 106 aa15.05■□□□□ -0
MKS1-211ENST00000581761 RNF103O00237 685 aa15.05■□□□□ -0
MKS1-211ENST00000581761 NCAM2O15394 837 aa15.05■□□□□ -0
MKS1-211ENST00000581761 TLL1O43897 1013 aa15.05■□□□□ -0
MKS1-211ENST00000581761 METTL18O95568 372 aa15.05■□□□□ -0
MKS1-211ENST00000581761 AGTP01019 485 aa15.05■□□□□ -0
MKS1-211ENST00000581761 SRGAP2BP0DMP2 458 aa15.05■□□□□ -0
MKS1-211ENST00000581761 SLC2A3P11169 496 aa15.05■□□□□ -0
MKS1-211ENST00000581761 TPSB2P20231 275 aa15.05■□□□□ -0
MKS1-211ENST00000581761 MX2P20592 715 aa15.05■□□□□ -0
MKS1-211ENST00000581761 HTR7P34969 479 aa15.05■□□□□ -0
MKS1-211ENST00000581761 FDFT1P37268 417 aa15.05■□□□□ -0
MKS1-211ENST00000581761 MAGEA6P43360 314 aa15.05■□□□□ -0
MKS1-211ENST00000581761 GRIN2CQ14957 1233 aa15.05■□□□□ -0
MKS1-211ENST00000581761 TPSAB1Q15661 275 aa15.05■□□□□ -0
MKS1-211ENST00000581761 MSS51Q4VC12 460 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
MKS1-211ENST00000581761 SYCP2LQ5T4T6 812 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
MKS1-211ENST00000581761 CAPN12Q6ZSI9 719 aa15.05■□□□□ -0
MKS1-211ENST00000581761 TP53INP2Q8IXH6 220 aa15.05■□□□□ -0
MKS1-211ENST00000581761 NPWQ8N729 165 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ATP11CQ8NB49 1132 aa15.05■□□□□ -0
MKS1-211ENST00000581761 PYROXD1Q8WU10 500 aa15.05■□□□□ -0
MKS1-211ENST00000581761 P2RY11Q96G91 374 aa15.05■□□□□ -0
MKS1-211ENST00000581761 FCRL2Q96LA5 508 aaPredicted RBP15.05■□□□□ -0
MKS1-211ENST00000581761 SERPINB12Q96P63 405 aa15.05■□□□□ -0
MKS1-211ENST00000581761 RAD9AQ99638 391 aa15.05■□□□□ -0
MKS1-211ENST00000581761 FRMD8Q9BZ67 464 aaPredicted RBP15.05■□□□□ -0
MKS1-211ENST00000581761 BRD8Q9H0E9 1235 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ZNF576Q9H609 170 aa15.05■□□□□ -0
MKS1-211ENST00000581761 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.05■□□□□ -0
MKS1-211ENST00000581761 SPG21Q9NZD8 308 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.05■□□□□ -0
MKS1-211ENST00000581761 AFF4Q9UHB7 1163 aaKnown RBP15.05■□□□□ -0
MKS1-211ENST00000581761 MAGED2Q9UNF1 606 aaPredicted RBP15.05■□□□□ -0
MKS1-211ENST00000581761 TLR6Q9Y2C9 796 aa15.05■□□□□ -0
MKS1-211ENST00000581761 ZNF638Q14966 1978 aaKnown RBP15.04■□□□□ -0
MKS1-211ENST00000581761 CARNS1A5YM72 827 aa15.04■□□□□ -0
MKS1-211ENST00000581761 KCNU1A8MYU2 1149 aa15.04■□□□□ -0
MKS1-211ENST00000581761 E7EVH7 732 aa15.04■□□□□ -0
MKS1-211ENST00000581761 FGF10O15520 208 aaPredicted RBP15.04■□□□□ -0
MKS1-211ENST00000581761 OPHN1O60890 802 aa15.04■□□□□ -0
MKS1-211ENST00000581761 TCEA3O75764 348 aa15.04■□□□□ -0
MKS1-211ENST00000581761 APOEP02649 317 aa15.04■□□□□ -0
MKS1-211ENST00000581761 ATF6P18850 670 aa15.04■□□□□ -0
MKS1-211ENST00000581761 PHBP35232 272 aa15.04■□□□□ -0
MKS1-211ENST00000581761 TUFMP49411 452 aaKnown RBP15.04■□□□□ -0
MKS1-211ENST00000581761 PPP2R2AP63151 447 aa15.04■□□□□ -0
MKS1-211ENST00000581761 COG7P83436 770 aa15.04■□□□□ -0
MKS1-211ENST00000581761 DSG1Q02413 1049 aa15.04■□□□□ -0
MKS1-211ENST00000581761 TRIP4Q15650 581 aaPredicted RBP15.04■□□□□ -0
MKS1-211ENST00000581761 C10orf120Q5SQS8 335 aa15.04■□□□□ -0
MKS1-211ENST00000581761 MCUQ8NE86 351 aa15.04■□□□□ -0
MKS1-211ENST00000581761 FBXO36Q8NEA4 188 aa15.04■□□□□ -0
MKS1-211ENST00000581761 SLC39A13Q96H72 371 aa15.04■□□□□ -0
MKS1-211ENST00000581761 YME1L1Q96TA2 773 aa15.04■□□□□ -0
MKS1-211ENST00000581761 CLSTN3Q9BQT9 956 aa15.04■□□□□ -0
MKS1-211ENST00000581761 ZBED2Q9BTP6 218 aa15.04■□□□□ -0
MKS1-211ENST00000581761 TTLL2Q9BWV7 592 aa15.04■□□□□ -0
MKS1-211ENST00000581761 CAPS2Q9BXY5 557 aa15.04■□□□□ -0
MKS1-211ENST00000581761 CATSPERBQ9H7T0 1116 aa15.04■□□□□ -0
MKS1-211ENST00000581761 HS3ST4Q9Y661 456 aa15.04■□□□□ -0
MKS1-211ENST00000581761 GBF1Q92538 1859 aa15.03■□□□□ -0
MKS1-211ENST00000581761 SLC12A8A0AV02 714 aa15.03■□□□□ -0
MKS1-211ENST00000581761 F5H423 210 aaPredicted RBP15.03■□□□□ -0
MKS1-211ENST00000581761 URODP06132 367 aa15.03■□□□□ -0
MKS1-211ENST00000581761 APRTP07741 180 aa15.03■□□□□ -0
MKS1-211ENST00000581761 FOSL2P15408 326 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms