RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 FAM114A1Q8IWE2 563 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 DHX40Q8IX18 779 aaKnown RBP21.67■■□□□ 1.06
CCDC42-203ENST00000581598 ADAM32Q8TC27 787 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 MYEOVQ96EZ4 313 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 MYO19Q96H55 970 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 BTN2A3PQ96KV6 586 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 SIX2Q9NPC8 291 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 PRSS16Q9NQE7 514 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 STIM2Q9P246 746 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 WASF3Q9UPY6 502 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 NUMA1Q14980 2115 aa21.67■■□□□ 1.06
CCDC42-203ENST00000581598 GJB3O75712 270 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 MAOBP27338 520 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 MYL5Q02045 173 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 APBA1Q02410 837 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 ARID5BQ14865 1188 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 NCAPHQ15003 741 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 WDTC1Q8N5D0 677 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 SLC2A13Q96QE2 648 aa21.66■■□□□ 1.06
CCDC42-203ENST00000581598 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC42-203ENST00000581598 INTS6Q9UL03 887 aaKnown RBP21.66■■□□□ 1.06
CCDC42-203ENST00000581598 CFAP47Q6ZTR5 3102 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 LUC7L3O95232 432 aaKnown RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 MOCS2O96007 188 aaPredicted RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 USP8P40818 1118 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 RPS14P62263 151 aaKnown RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 PTK2Q05397 1052 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 CDH18Q13634 790 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 HNRNPDQ14103 355 aaKnown RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 TPD52L1Q16890 204 aaPredicted RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 DCAF6Q58WW2 860 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 ZC3H12AQ5D1E8 599 aaKnown RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 CCDC117Q8IWD4 279 aaPredicted RBP21.65■■□□□ 1.06
CCDC42-203ENST00000581598 AOPEPQ8N6M6 819 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 ZNF366Q8N895 744 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 ATP6V0D2Q8N8Y2 350 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 CPXM1Q96SM3 734 aa21.65■■□□□ 1.06
CCDC42-203ENST00000581598 HSF2BPO75031 334 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 SLC2A3P11169 496 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 CD59P13987 128 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 TACR2P21452 398 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 CSKP41240 450 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 ST8SIA6P61647 398 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 GRIK2Q13002 908 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 MTA1Q13330 715 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 EFHC1Q5JVL4 640 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 CACUL1Q86Y37 369 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 CARNMT1Q8N4J0 409 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 C1orf216Q8TAB5 229 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 PPP1R13BQ96KQ4 1090 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 MRGPRX3Q96LB0 322 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 NOX5Q96PH1 765 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 RBSNQ9H1K0 784 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 RSPH9Q9H1X1 276 aaPredicted RBP21.64■■□□□ 1.05
CCDC42-203ENST00000581598 KIAA1522Q9P206 1035 aaPredicted RBP21.64■■□□□ 1.05
CCDC42-203ENST00000581598 TJP2Q9UDY2 1190 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 SLC12A6Q9UHW9 1150 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 XPO7Q9UIA9 1087 aaKnown RBP21.64■■□□□ 1.05
CCDC42-203ENST00000581598 DNAJC12Q9UKB3 198 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 SCML1Q9UN30 329 aa21.64■■□□□ 1.05
CCDC42-203ENST00000581598 USP24Q9UPU5 2620 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 ITIH6Q6UXX5 1313 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 SMTNL1A8MU46 457 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 KCNU1A8MYU2 1149 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 BCAT2O15382 392 aaPredicted RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 MOCS3O95396 460 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 DNTTP04053 509 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 SRPRAP08240 638 aaKnown RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 CLCN1P35523 988 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 SNX16P57768 344 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 PITX1P78337 314 aaPredicted RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 CDK17Q00537 523 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 TAF5Q15542 800 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 ST3GAL2Q16842 350 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 HNRNPA1L2Q32P51 320 aaKnown RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 TTC31Q49AM3 519 aaPredicted RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 FSCBQ5H9T9 825 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 PITRM1Q5JRX3 1037 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 RAP1GAP2Q684P5 730 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 ZNF776Q68DI1 518 aaPredicted RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 DPY19L2P1Q6NXN4 242 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 CHSY1Q86X52 802 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 LGI2Q8N0V4 545 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 DEFB106AQ8N104 65 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 CFAP52Q8N1V2 620 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 ZCCHC9Q8N567 271 aaKnown RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 PRMT1Q99873 361 aaKnown RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 BTBD1Q9H0C5 482 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 NDST4Q9H3R1 872 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 OSGEPQ9NPF4 335 aa21.63■■□□□ 1.05
CCDC42-203ENST00000581598 AJAP1Q9UKB5 411 aaPredicted RBP21.63■■□□□ 1.05
CCDC42-203ENST00000581598 NYNRINQ9P2P1 1898 aaKnown RBP21.62■■□□□ 1.05
CCDC42-203ENST00000581598 FOXN3O00409 490 aaPredicted RBP21.62■■□□□ 1.05
CCDC42-203ENST00000581598 CCR1P32246 355 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 ACSL1P33121 698 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 BPIFB4P59827 614 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 FOXC1Q12948 553 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 SLC12A1Q13621 1099 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 VWA3BQ502W6 1294 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 MIIPQ5JXC2 388 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms